Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16380

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,546,021	+		RR42_RS16370	0.81	+0.5
3,546,021	+		RR42_RS16370	0.81	+0.8
3,546,112	-				+0.1
3,546,112	-				-1.7
3,546,329	+		RR42_RS16375	0.18	-0.2
3,546,476	+		RR42_RS16375	0.37	-0.1
3,546,553	+		RR42_RS16375	0.47	+0.5
3,546,554	-		RR42_RS16375	0.47	-0.6
3,546,624	+		RR42_RS16375	0.56	-2.2
3,546,714	-		RR42_RS16375	0.68	-0.8
3,547,017	+				-0.6
3,547,018	-				+0.7
3,547,056	+				-2.8
3,547,056	+				-3.2
3,547,056	+				-0.1
3,547,057	-				+0.7
3,547,057	-				+1.0
3,547,116	+		RR42_RS16380	0.12	-1.2
3,547,202	+		RR42_RS16380	0.21	-0.3
3,547,202	+		RR42_RS16380	0.21	+0.6
3,547,202	+		RR42_RS16380	0.21	+0.5
3,547,233	+		RR42_RS16380	0.24	+0.6
3,547,234	-		RR42_RS16380	0.24	+0.5
3,547,300	-		RR42_RS16380	0.31	+1.5
3,547,604	-		RR42_RS16380	0.62	+0.2
3,547,649	+		RR42_RS16380	0.67	-1.1
3,547,650	-		RR42_RS16380	0.67	+0.4
3,547,650	-		RR42_RS16380	0.67	-0.9
3,547,688	-		RR42_RS16380	0.71	+0.3
3,547,839	-		RR42_RS16380	0.87	-0.2
3,547,839	-		RR42_RS16380	0.87	+1.8
3,547,901	+				-3.0
3,547,949	+				+1.3
3,547,949	+				-1.1
3,548,080	-		RR42_RS16385	0.16	-0.5
3,548,080	-		RR42_RS16385	0.16	+0.6
3,548,193	-		RR42_RS16385	0.33	-0.3
3,548,221	+		RR42_RS16385	0.37	-0.0
3,548,224	-		RR42_RS16385	0.37	-1.8
3,548,224	-		RR42_RS16385	0.37	-0.6
3,548,319	+		RR42_RS16385	0.51	+0.9
3,548,319	+		RR42_RS16385	0.51	-0.1
3,548,323	-		RR42_RS16385	0.52	-1.2
3,548,381	-		RR42_RS16385	0.61	-0.1
3,548,454	+		RR42_RS16385	0.72	+1.1
3,548,455	-		RR42_RS16385	0.72	+0.9
3,548,496	+		RR42_RS16385	0.78	-0.1
3,548,497	-		RR42_RS16385	0.78	-0.6
3,548,593	-				-0.1
3,548,644	+				-2.9
3,548,645	-				-1.5
3,548,645	-				+0.5
3,548,722	+		RR42_RS16390	0.10	+1.3
3,548,723	-		RR42_RS16390	0.11	-0.8
3,548,723	-		RR42_RS16390	0.11	-0.2
3,548,723	-		RR42_RS16390	0.11	-0.7
3,548,794	-		RR42_RS16390	0.21	-0.0
3,548,897	+		RR42_RS16390	0.36	+0.4
3,548,898	-		RR42_RS16390	0.37	+0.7