Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15390

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,326,873	+		RR42_RS15385	0.42	+0.6
3,326,873	+		RR42_RS15385	0.42	+0.5
3,326,873	+		RR42_RS15385	0.42	-1.0
3,326,874	-		RR42_RS15385	0.42	+1.5
3,327,023	+		RR42_RS15385	0.54	+1.0
3,327,023	+		RR42_RS15385	0.54	-0.5
3,327,023	+		RR42_RS15385	0.54	-0.7
3,327,023	+		RR42_RS15385	0.54	+0.5
3,327,023	+		RR42_RS15385	0.54	+0.7
3,327,023	+		RR42_RS15385	0.54	-0.2
3,327,024	-		RR42_RS15385	0.54	+1.7
3,327,029	+		RR42_RS15385	0.55	-0.1
3,327,235	+		RR42_RS15385	0.71	+1.1
3,327,235	+		RR42_RS15385	0.71	+0.0
3,327,235	+		RR42_RS15385	0.71	-1.0
3,327,236	-		RR42_RS15385	0.71	+0.8
3,327,239	+		RR42_RS15385	0.71	+1.6
3,327,239	+		RR42_RS15385	0.71	-1.0
3,327,239	+		RR42_RS15385	0.71	+1.2
3,327,239	+		RR42_RS15385	0.71	-0.5
3,327,240	-		RR42_RS15385	0.71	+1.1
3,327,240	-		RR42_RS15385	0.71	+0.9
3,327,240	-		RR42_RS15385	0.71	+0.9
3,327,492	-				-2.3
3,327,492	-				+0.3
3,327,557	+				-1.4
3,327,557	+				-0.1
3,327,557	+				-2.4
3,327,557	+				-0.4
3,327,557	+				+1.4
3,327,558	-				+0.1
3,327,558	-				+1.3
3,327,558	-				-0.0
3,327,558	-				+0.5
3,327,993	+		RR42_RS15390	0.43	+0.6
3,327,994	-		RR42_RS15390	0.44	+0.7
3,328,030	-		RR42_RS15390	0.48	-0.5
3,328,144	-		RR42_RS15390	0.61	+2.5
3,328,296	+		RR42_RS15390	0.78	-0.4
3,328,296	+		RR42_RS15390	0.78	+1.5
3,328,297	-		RR42_RS15390	0.78	-0.1
3,328,297	-		RR42_RS15390	0.78	+0.8
3,328,297	-		RR42_RS15390	0.78	+1.1
3,328,297	-		RR42_RS15390	0.78	-0.5
3,328,297	-		RR42_RS15390	0.78	+1.2
3,328,303	+		RR42_RS15390	0.79	-1.0
3,328,304	-		RR42_RS15390	0.79	-1.2
3,328,304	-		RR42_RS15390	0.79	+0.4
3,328,422	+				-1.2
3,328,423	-				-2.5
3,328,423	-				+1.0
3,328,507	+				-3.3
3,328,508	-				+1.0
3,328,508	-				-1.0
3,328,508	-				+0.4
3,328,638	-		RR42_RS15395	0.11	+1.2
3,328,742	+		RR42_RS15395	0.24	+1.1
3,328,742	+		RR42_RS15395	0.24	+1.5
3,328,871	+		RR42_RS15395	0.39	-1.0
3,328,871	+		RR42_RS15395	0.39	+0.6
3,328,964	+		RR42_RS15395	0.51	-1.2
3,328,964	+		RR42_RS15395	0.51	+0.7
3,328,964	+		RR42_RS15395	0.51	-0.5
3,329,013	-		RR42_RS15395	0.57	-1.1
3,329,082	-		RR42_RS15395	0.65	+0.9
3,329,082	-		RR42_RS15395	0.65	+0.7
3,329,082	-		RR42_RS15395	0.65	+0.2
3,329,082	-		RR42_RS15395	0.65	+1.4
3,329,086	+		RR42_RS15395	0.66	+1.7
3,329,087	-		RR42_RS15395	0.66	+0.1
3,329,114	+		RR42_RS15395	0.69	+0.9
3,329,114	+		RR42_RS15395	0.69	-2.4
3,329,114	+		RR42_RS15395	0.69	-0.0
3,329,115	-		RR42_RS15395	0.69	-1.0
3,329,128	-		RR42_RS15395	0.71	+0.2
3,329,402	+				+1.0
3,329,403	-				+1.4
3,329,429	-				-0.4