Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14650

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
3,152,119	+		RR42_RS14645	0.75	-1.1
3,152,119	+		RR42_RS14645	0.75	-0.9
3,152,119	+		RR42_RS14645	0.75	-0.3
3,152,120	-		RR42_RS14645	0.75	+0.3
3,152,150	-		RR42_RS14645	0.77	+0.4
3,152,150	-		RR42_RS14645	0.77	-0.3
3,152,150	-		RR42_RS14645	0.77	-2.9
3,152,381	-				-2.9
3,152,505	+				-1.4
3,152,505	+				-0.1
3,152,505	+				-0.4
3,152,506	-				-0.3
3,152,506	-				+0.3
3,152,644	-				-0.7
3,152,685	-				-0.5
3,152,685	-				-1.8
3,152,685	-				-0.9
3,152,821	+				+1.0
3,152,821	+				+0.2
3,152,821	+				+0.3
3,152,822	-				-0.2
3,152,822	-				+0.5
3,152,822	-				+0.2
3,152,822	-				-1.1
3,152,980	+				-0.2
3,152,981	-				+0.7
3,152,986	+				-0.7
3,152,986	+				-1.8
3,152,987	-				+0.5
3,153,421	+		RR42_RS14650	0.29	-2.3
3,153,421	+		RR42_RS14650	0.29	+0.0
3,153,422	-		RR42_RS14650	0.29	-1.3
3,153,422	-		RR42_RS14650	0.29	-2.8
3,153,481	+		RR42_RS14650	0.32	-0.4
3,153,481	+		RR42_RS14650	0.32	-1.2
3,153,482	-		RR42_RS14650	0.32	-0.6
3,153,482	-		RR42_RS14650	0.32	+0.7
3,153,482	-		RR42_RS14650	0.32	-0.8
3,153,482	-		RR42_RS14650	0.32	-0.6
3,153,482	-		RR42_RS14650	0.32	-1.5
3,153,482	-		RR42_RS14650	0.32	-1.8
3,153,499	+		RR42_RS14650	0.33	+2.0
3,153,500	-		RR42_RS14650	0.33	-0.8
3,153,500	-		RR42_RS14650	0.33	+2.5
3,153,582	+		RR42_RS14650	0.37	+0.4
3,153,582	+		RR42_RS14650	0.37	+0.4
3,153,582	+		RR42_RS14650	0.37	-1.3
3,153,582	+		RR42_RS14650	0.37	+0.3
3,153,893	+		RR42_RS14650	0.54	+1.8
3,154,006	+		RR42_RS14650	0.61	+0.0
3,154,006	+		RR42_RS14650	0.61	+0.7
3,154,007	-		RR42_RS14650	0.61	-1.4
3,154,007	-		RR42_RS14650	0.61	-0.6
3,154,227	+		RR42_RS14650	0.73	+1.5
3,154,227	+		RR42_RS14650	0.73	+0.3
3,154,228	-		RR42_RS14650	0.73	+0.5
3,154,228	-		RR42_RS14650	0.73	+1.4
3,154,366	-		RR42_RS14650	0.80	+1.5
3,154,679	-				+1.4
3,154,679	-				-0.5
3,154,787	+				+0.9
3,154,827	+				+0.0
3,154,827	+				-1.8
3,154,848	-				-1.2
3,155,205	+				+0.3
3,155,515	+				-2.7
3,155,515	+				+0.3
3,155,515	+				-1.4
3,155,522	+				+1.2
3,155,522	+				+0.7
3,155,522	+				-0.3
3,155,523	-				+1.2
3,155,566	+				+0.4
3,155,566	+				+0.0