Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13555

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,924,656	+				-0.5
2,924,767	+				+0.5
2,924,942	-		RR42_RS13550	0.28	+0.7
2,925,051	+		RR42_RS13550	0.41	-0.1
2,925,051	+		RR42_RS13550	0.41	-0.3
2,925,052	-		RR42_RS13550	0.41	+0.0
2,925,058	-		RR42_RS13550	0.42	+0.5
2,925,091	+		RR42_RS13550	0.46	-1.7
2,925,092	-		RR42_RS13550	0.46	-0.0
2,925,608	+				-0.7
2,925,609	-				+0.2
2,925,609	-				-0.9
2,925,822	-		RR42_RS13555	0.13	-1.1
2,926,035	-		RR42_RS13555	0.21	-0.6
2,926,064	+		RR42_RS13555	0.23	-1.6
2,926,115	+		RR42_RS13555	0.25	+0.8
2,926,206	+		RR42_RS13555	0.29	+0.1
2,926,251	+		RR42_RS13555	0.30	-1.9
2,926,251	+		RR42_RS13555	0.30	+0.3
2,926,252	-		RR42_RS13555	0.30	-0.9
2,926,253	+		RR42_RS13555	0.31	-0.2
2,926,254	-		RR42_RS13555	0.31	-0.3
2,926,580	+		RR42_RS13555	0.44	+0.5
2,926,580	+		RR42_RS13555	0.44	-0.2
2,926,580	+		RR42_RS13555	0.44	-1.1
2,926,581	-		RR42_RS13555	0.44	-0.1
2,926,581	-		RR42_RS13555	0.44	-0.3
2,926,581	-		RR42_RS13555	0.44	-0.9
2,926,909	+		RR42_RS13555	0.58	+0.5
2,926,910	-		RR42_RS13555	0.58	-1.9
2,926,910	-		RR42_RS13555	0.58	-0.9
2,926,910	-		RR42_RS13555	0.58	-0.4
2,927,336	+		RR42_RS13555	0.76	+0.3
2,927,385	+		RR42_RS13555	0.78	+0.2
2,927,494	-		RR42_RS13555	0.82	+1.6
2,927,525	+		RR42_RS13555	0.84	+1.5
2,927,525	+		RR42_RS13555	0.84	+0.1
2,927,804	+				-0.7
2,927,804	+				+0.2
2,927,829	-				-0.1
2,927,874	-				-0.7
2,928,425	+		RR42_RS13560	0.17	-0.7
2,928,532	+		RR42_RS13560	0.22	+0.5
2,928,534	+		RR42_RS13560	0.23	-0.0
2,928,534	+		RR42_RS13560	0.23	-1.6
2,928,534	+		RR42_RS13560	0.23	-1.9
2,928,535	-		RR42_RS13560	0.23	-0.7
2,928,573	+		RR42_RS13560	0.25	-0.9
2,928,603	+		RR42_RS13560	0.26	-1.1
2,928,603	+		RR42_RS13560	0.26	-1.4
2,928,604	-		RR42_RS13560	0.26	+0.3
2,928,604	-		RR42_RS13560	0.26	+1.5
2,928,635	+		RR42_RS13560	0.28	-0.4
2,928,635	+		RR42_RS13560	0.28	+0.3
2,928,747	+		RR42_RS13560	0.34	-3.2
2,928,840	+		RR42_RS13560	0.39	-0.3
2,928,840	+		RR42_RS13560	0.39	-0.9
2,928,840	+		RR42_RS13560	0.39	+0.8
2,928,841	-		RR42_RS13560	0.39	+1.2
2,928,841	-		RR42_RS13560	0.39	-0.1