Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13180

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,838,868	-				-0.4
2,838,868	-				+0.3
2,839,075	+		RR42_RS13175	0.14	+1.1
2,839,076	-		RR42_RS13175	0.14	+0.8
2,839,076	-		RR42_RS13175	0.14	-0.9
2,839,076	-		RR42_RS13175	0.14	+0.9
2,839,076	-		RR42_RS13175	0.14	+1.7
2,839,164	+		RR42_RS13175	0.24	+0.1
2,839,164	+		RR42_RS13175	0.24	-0.5
2,839,328	-		RR42_RS13175	0.43	+0.9
2,839,377	+		RR42_RS13175	0.49	+0.1
2,839,378	-		RR42_RS13175	0.49	+1.8
2,839,378	-		RR42_RS13175	0.49	-0.4
2,839,551	-		RR42_RS13175	0.69	-0.1
2,839,551	-		RR42_RS13175	0.69	-1.9
2,839,558	-		RR42_RS13175	0.69	-3.2
2,839,631	+		RR42_RS13175	0.78	-0.3
2,839,631	+		RR42_RS13175	0.78	+0.4
2,839,632	-		RR42_RS13175	0.78	-0.9
2,839,671	+		RR42_RS13175	0.82	+0.1
2,839,671	+		RR42_RS13175	0.82	-0.8
2,839,671	+		RR42_RS13175	0.82	+1.2
2,839,671	+		RR42_RS13175	0.82	+1.4
2,839,671	+		RR42_RS13175	0.82	-0.2
2,839,671	+		RR42_RS13175	0.82	-0.4
2,839,671	+		RR42_RS13175	0.82	+1.4
2,839,672	-		RR42_RS13175	0.83	+0.2
2,839,672	-		RR42_RS13175	0.83	+1.3
2,839,672	-		RR42_RS13175	0.83	+0.1
2,839,672	-		RR42_RS13175	0.83	+0.5
2,839,672	-		RR42_RS13175	0.83	+1.0
2,839,672	-		RR42_RS13175	0.83	-0.1
2,839,672	-		RR42_RS13175	0.83	-0.2
2,839,801	-				-1.1
2,839,801	-				-0.2
2,839,803	-				-0.5
2,839,822	-				+0.8
2,839,846	+				+1.2
2,839,912	+				-0.5
2,840,023	+		RR42_RS13180	0.21	-1.8
2,840,032	+		RR42_RS13180	0.22	+0.3
2,840,033	-		RR42_RS13180	0.22	+0.1
2,840,033	-		RR42_RS13180	0.22	+1.0
2,840,033	-		RR42_RS13180	0.22	-1.3
2,840,036	+		RR42_RS13180	0.22	-0.4
2,840,036	+		RR42_RS13180	0.22	-0.8
2,840,036	+		RR42_RS13180	0.22	+0.3
2,840,036	+		RR42_RS13180	0.22	-1.1
2,840,059	+		RR42_RS13180	0.25	-0.2
2,840,092	+		RR42_RS13180	0.29	-0.7
2,840,188	+		RR42_RS13180	0.40	+0.1
2,840,188	+		RR42_RS13180	0.40	-0.8
2,840,189	-		RR42_RS13180	0.41	+0.2
2,840,242	+		RR42_RS13180	0.47	-1.3
2,840,242	+		RR42_RS13180	0.47	-0.1
2,840,243	-		RR42_RS13180	0.47	-0.4
2,840,243	-		RR42_RS13180	0.47	+0.0
2,840,243	-		RR42_RS13180	0.47	+0.3
2,840,243	-		RR42_RS13180	0.47	+0.2
2,840,300	-		RR42_RS13180	0.54	+0.0
2,840,335	+		RR42_RS13180	0.58	+0.9
2,840,335	+		RR42_RS13180	0.58	+0.4
2,840,392	+		RR42_RS13180	0.64	-0.6
2,840,410	+		RR42_RS13180	0.67	-0.5
2,840,537	-		RR42_RS13180	0.82	+1.7
2,840,537	-		RR42_RS13180	0.82	-1.1
2,840,693	+				+4.2
2,840,693	+				+2.2
2,840,693	+				+1.6
2,840,693	+				+2.5
2,840,694	-				+2.8
2,840,694	-				+2.7
2,840,836	+		RR42_RS13185	0.12	+1.9
2,840,863	-		RR42_RS13185	0.15	+2.7
2,840,863	-		RR42_RS13185	0.15	+1.3
2,840,863	-		RR42_RS13185	0.15	+2.8
2,841,249	+		RR42_RS13185	0.47	+3.2
2,841,249	+		RR42_RS13185	0.47	+2.5
2,841,250	-		RR42_RS13185	0.47	-0.1
2,841,250	-		RR42_RS13185	0.47	+3.9
2,841,262	-		RR42_RS13185	0.49	+2.8
2,841,357	+		RR42_RS13185	0.57	+2.7
2,841,358	-		RR42_RS13185	0.57	+2.9
2,841,502	-		RR42_RS13185	0.69	+2.2
2,841,502	-		RR42_RS13185	0.69	+2.8
2,841,502	-		RR42_RS13185	0.69	+2.7
2,841,502	-		RR42_RS13185	0.69	+2.4