Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12625

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,709,766	-				+0.2
2,709,778	+				-0.9
2,709,779	-				-0.5
2,709,804	+				-0.9
2,709,804	+				-1.9
2,709,805	-				+0.2
2,709,805	-				+0.9
2,709,887	+				+0.1
2,709,888	-				+0.6
2,709,931	+				+0.8
2,710,185	+				-0.5
2,710,229	+				+0.6
2,710,229	+				+0.6
2,710,230	-				+0.7
2,710,230	-				-1.5
2,710,240	+				-0.6
2,710,240	+				+0.1
2,710,257	+				+0.1
2,710,258	-				+0.7
2,710,375	+				-0.3
2,710,376	-				+0.7
2,710,441	+				-0.3
2,710,444	+				-2.1
2,710,445	-				-1.1
2,710,445	-				-0.9
2,710,445	-				-3.0
2,710,461	-				-0.5
2,710,486	+				+1.4
2,710,536	+		RR42_RS12625	0.11	-1.1
2,710,536	+		RR42_RS12625	0.11	+0.1
2,710,536	+		RR42_RS12625	0.11	+0.5
2,710,536	+		RR42_RS12625	0.11	-1.9
2,710,537	-		RR42_RS12625	0.11	-1.3
2,710,537	-		RR42_RS12625	0.11	+0.2
2,710,581	-		RR42_RS12625	0.20	-1.0
2,710,588	+		RR42_RS12625	0.21	-1.4
2,710,588	+		RR42_RS12625	0.21	-1.8
2,710,588	+		RR42_RS12625	0.21	-0.5
2,710,588	+		RR42_RS12625	0.21	-0.1
2,710,589	-		RR42_RS12625	0.21	+0.3
2,710,597	-		RR42_RS12625	0.23	-0.9
2,710,597	-		RR42_RS12625	0.23	+1.4
2,710,666	-		RR42_RS12625	0.36	+0.9
2,710,701	+		RR42_RS12625	0.42	-2.0
2,710,749	-		RR42_RS12625	0.52	+0.1
2,710,833	-		RR42_RS12625	0.68	+0.0
2,710,945	-		RR42_RS12625	0.89	+0.1
2,710,945	-		RR42_RS12625	0.89	-2.6
2,710,945	-		RR42_RS12625	0.89	-1.0
2,710,945	-		RR42_RS12625	0.89	-0.1
2,711,008	+				+0.9
2,711,008	+				-0.1
2,711,009	-				-1.4