Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12555

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,697,958	-				+1.3
2,698,054	-				-1.8
2,698,116	+				+1.1
2,698,202	+		RR42_RS12550	0.19	-1.5
2,698,443	+		RR42_RS12550	0.83	-2.0
2,698,443	+		RR42_RS12550	0.83	-0.6
2,698,444	-		RR42_RS12550	0.83	-1.7
2,698,546	+				+1.2
2,698,547	-				+0.7
2,698,547	-				+0.7
2,698,649	+				-1.2
2,698,649	+				-1.3
2,698,650	-				-3.2
2,698,650	-				-1.9
2,698,650	-				-3.5
2,698,756	+		RR42_RS12555	0.22	-1.5
2,698,756	+		RR42_RS12555	0.22	-0.9
2,698,757	-		RR42_RS12555	0.22	-4.6
2,698,757	-		RR42_RS12555	0.22	-0.4
2,698,757	-		RR42_RS12555	0.22	+0.9
2,698,762	+		RR42_RS12555	0.23	-0.3
2,698,762	+		RR42_RS12555	0.23	-3.0
2,698,762	+		RR42_RS12555	0.23	-0.9
2,698,762	+		RR42_RS12555	0.23	-2.5
2,698,763	-		RR42_RS12555	0.23	-2.1
2,698,985	-		RR42_RS12555	0.71	-1.1
2,698,985	-		RR42_RS12555	0.71	-1.9
2,698,985	-		RR42_RS12555	0.71	-4.6
2,699,094	-				-0.7
2,699,224	-				-0.3
2,699,224	-				-1.5
2,699,224	-				-1.7
2,699,224	-				-3.4
2,699,236	-				-0.4
2,699,484	+				-1.5
2,699,485	-				-1.2
2,699,566	-				+0.9
2,699,896	+		RR42_RS12560	0.24	-0.7
2,699,897	-		RR42_RS12560	0.24	-0.8
2,699,897	-		RR42_RS12560	0.24	-0.5