Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12510

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,689,441	+				+3.6
2,689,486	-		RR42_RS12505	0.14	+1.2
2,689,591	+		RR42_RS12505	0.32	+0.8
2,689,594	-		RR42_RS12505	0.32	-0.4
2,689,617	+		RR42_RS12505	0.36	+0.2
2,689,618	-		RR42_RS12505	0.36	-2.5
2,689,626	+		RR42_RS12505	0.37	-0.1
2,689,627	-		RR42_RS12505	0.37	-0.4
2,689,627	-		RR42_RS12505	0.37	+0.1
2,689,630	+		RR42_RS12505	0.38	-0.2
2,689,630	+		RR42_RS12505	0.38	+2.4
2,689,630	+		RR42_RS12505	0.38	-2.5
2,689,833	+		RR42_RS12505	0.71	-2.1
2,689,834	-		RR42_RS12505	0.72	-2.3
2,689,839	+		RR42_RS12505	0.72	+0.7
2,689,839	+		RR42_RS12505	0.72	-0.6
2,689,839	+		RR42_RS12505	0.72	-1.0
2,689,839	+		RR42_RS12505	0.72	-0.7
2,689,840	-		RR42_RS12505	0.73	+0.1
2,689,840	-		RR42_RS12505	0.73	+1.0
2,689,896	+		RR42_RS12505	0.82	-2.6
2,689,896	+		RR42_RS12505	0.82	+1.7
2,689,896	+		RR42_RS12505	0.82	-2.5
2,689,897	-		RR42_RS12505	0.82	-0.9
2,689,899	+		RR42_RS12505	0.82	+0.9
2,689,899	+		RR42_RS12505	0.82	-0.5
2,690,142	-				-0.3
2,690,149	+				-1.4
2,690,149	+				-2.7
2,690,149	+				-0.9
2,690,149	+				-0.0
2,690,150	-				-1.9
2,690,150	-				+0.6
2,690,150	-				-1.1
2,690,150	-				-2.7
2,690,150	-				-0.1
2,690,150	-				-3.5
2,690,150	-				+0.2
2,690,536	+		RR42_RS12510	0.35	+0.3
2,690,536	+		RR42_RS12510	0.35	+0.2
2,690,536	+		RR42_RS12510	0.35	+0.0
2,690,536	+		RR42_RS12510	0.35	-1.7
2,690,537	-		RR42_RS12510	0.36	+1.3
2,690,679	+		RR42_RS12510	0.53	+0.6
2,690,680	-		RR42_RS12510	0.53	+0.1
2,690,944	-		RR42_RS12510	0.84	-3.5
2,691,051	-				-0.7
2,691,141	+				-0.2
2,691,142	-				-1.2
2,691,216	+		RR42_RS12515	0.24	+0.2
2,691,217	-		RR42_RS12515	0.24	-0.7
2,691,689	+		RR42_RS12520	0.27	-3.7
2,691,690	-		RR42_RS12520	0.27	-0.9
2,691,690	-		RR42_RS12520	0.27	-3.0
2,691,875	+		RR42_RS12520	0.66	-2.9
2,691,875	+		RR42_RS12520	0.66	-2.5
2,691,979	+		RR42_RS12520	0.89	-2.8
2,691,979	+		RR42_RS12520	0.89	-2.1
2,691,980	-		RR42_RS12520	0.89	-0.4
2,692,019	-				-3.2