Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12425

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,667,126	+		RR42_RS12420	0.29	+0.5
2,667,321	+		RR42_RS12420	0.46	-2.7
2,667,322	-		RR42_RS12420	0.46	-0.7
2,667,322	-		RR42_RS12420	0.46	+0.1
2,667,500	+		RR42_RS12420	0.61	-0.6
2,667,501	-		RR42_RS12420	0.61	-0.4
2,667,501	-		RR42_RS12420	0.61	+0.8
2,667,554	+		RR42_RS12420	0.66	-2.3
2,667,587	+		RR42_RS12420	0.69	-0.5
2,667,587	+		RR42_RS12420	0.69	-0.5
2,667,587	+		RR42_RS12420	0.69	+0.6
2,667,587	+		RR42_RS12420	0.69	-0.0
2,667,587	+		RR42_RS12420	0.69	+0.6
2,667,587	+		RR42_RS12420	0.69	+0.2
2,667,587	+		RR42_RS12420	0.69	+1.7
2,667,588	-		RR42_RS12420	0.69	-0.1
2,667,618	+		RR42_RS12420	0.71	+0.7
2,667,618	+		RR42_RS12420	0.71	+0.8
2,667,624	-		RR42_RS12420	0.72	-0.2
2,667,624	-		RR42_RS12420	0.72	+2.4
2,667,889	-				+0.8
2,668,128	+		RR42_RS12425	0.19	+1.0
2,668,960	+				-2.1
2,668,960	+				-2.3
2,668,961	-				+0.2
2,668,961	-				-1.7
2,668,969	+				+1.3
2,668,969	+				-3.7
2,668,969	+				-0.0
2,668,969	+				-2.6
2,668,970	-				-1.3
2,669,012	+				-1.3
2,669,215	+				+1.5
2,669,215	-				-3.2
2,669,652	-		RR42_RS12430	0.50	+1.4
2,669,652	-		RR42_RS12430	0.50	-0.4