Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12150

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,609,351	+		RR42_RS12145	0.73	+0.2
2,609,668	+		RR42_RS12145	0.83	+0.0
2,609,836	-		RR42_RS12145	0.89	+0.5
2,609,836	-		RR42_RS12145	0.89	-0.6
2,610,166	+				-0.2
2,610,166	+				-0.4
2,610,166	+				+0.8
2,610,167	-				+0.8
2,610,167	-				-0.3
2,610,170	+				+0.1
2,610,171	-				-2.3
2,610,171	-				+0.0
2,610,266	+				-0.4
2,610,568	+		RR42_RS12150	0.19	-1.2
2,610,647	+		RR42_RS12150	0.23	-0.2
2,610,647	+		RR42_RS12150	0.23	+0.1
2,610,785	+		RR42_RS12150	0.32	+3.0
2,610,785	+		RR42_RS12150	0.32	-2.0
2,611,046	+		RR42_RS12150	0.48	+0.3
2,611,053	+		RR42_RS12150	0.48	+0.6
2,611,054	-		RR42_RS12150	0.48	-1.8
2,611,194	-		RR42_RS12150	0.56	-0.3
2,611,226	+		RR42_RS12150	0.58	+0.8
2,611,238	+		RR42_RS12150	0.59	-2.2
2,611,238	+		RR42_RS12150	0.59	+1.5
2,611,238	+		RR42_RS12150	0.59	-0.6
2,611,238	+		RR42_RS12150	0.59	+0.7
2,611,239	-		RR42_RS12150	0.59	-2.0
2,611,396	-		RR42_RS12150	0.69	-0.7
2,611,580	+		RR42_RS12150	0.80	-0.8
2,611,580	+		RR42_RS12150	0.80	+0.5
2,611,682	-		RR42_RS12150	0.86	+3.2
2,611,874	-				-1.2
2,612,194	-				-0.7
2,612,402	-		RR42_RS12155	0.30	+0.8
2,612,535	+		RR42_RS12155	0.48	-1.7
2,612,536	-		RR42_RS12155	0.48	-2.2
2,612,640	+		RR42_RS12155	0.63	-1.3
2,612,640	+		RR42_RS12155	0.63	+0.3