Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12050

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,583,001	-		RR42_RS12045	0.34	+1.1
2,583,021	+		RR42_RS12045	0.35	-0.0
2,583,021	+		RR42_RS12045	0.35	-1.4
2,583,021	+		RR42_RS12045	0.35	-1.2
2,583,021	+		RR42_RS12045	0.35	-2.4
2,583,103	+		RR42_RS12045	0.42	-0.6
2,583,777	+				-0.0
2,583,777	+				+0.2
2,583,778	-				+0.2
2,583,778	-				+0.6
2,583,778	-				-0.7
2,583,778	-				-0.2
2,583,853	+		RR42_RS12050	0.11	-2.2
2,583,853	+		RR42_RS12050	0.11	+1.0
2,583,853	+		RR42_RS12050	0.11	-1.5
2,583,880	+		RR42_RS12050	0.14	-2.5
2,583,880	+		RR42_RS12050	0.14	-1.8
2,583,880	+		RR42_RS12050	0.14	-2.6
2,583,881	-		RR42_RS12050	0.14	-2.7
2,583,884	+		RR42_RS12050	0.14	-2.7
2,583,885	-		RR42_RS12050	0.14	-1.5
2,584,004	-		RR42_RS12050	0.27	-1.7
2,584,121	+		RR42_RS12050	0.39	+0.3
2,584,121	+		RR42_RS12050	0.39	-4.4
2,584,121	+		RR42_RS12050	0.39	-2.5
2,584,121	+		RR42_RS12050	0.39	-3.4
2,584,122	-		RR42_RS12050	0.39	-2.3
2,584,122	-		RR42_RS12050	0.39	-0.4
2,584,344	-		RR42_RS12050	0.62	-1.9
2,584,777	-		RR42_RS12055	0.16	-0.2
2,584,777	-		RR42_RS12055	0.16	+1.1
2,584,779	+		RR42_RS12055	0.16	-1.7
2,584,779	+		RR42_RS12055	0.16	-1.2
2,584,780	-		RR42_RS12055	0.16	+0.5
2,584,822	-		RR42_RS12055	0.25	+0.4
2,584,960	+		RR42_RS12055	0.53	-1.3
2,585,101	-		RR42_RS12055	0.81	-1.7