Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12040

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,580,803	-				+0.1
2,580,803	-				-0.9
2,580,813	-				-2.3
2,580,815	+				+0.0
2,580,920	+				+0.3
2,580,962	+				+2.2
2,580,962	+				+2.3
2,580,963	-				+0.8
2,580,963	-				+0.1
2,580,963	-				-0.4
2,581,061	-				-2.2
2,581,062	+				-0.3
2,581,063	-				-1.2
2,581,063	-				-1.5
2,581,102	+				-3.6
2,581,102	+				-0.0
2,581,102	+				-0.2
2,581,189	-				-1.9
2,581,232	+				+1.1
2,581,233	-				-2.3
2,581,233	-				-4.2
2,581,233	-				-4.2
2,581,240	+				+0.7
2,581,253	-				-4.2
2,581,253	-				-2.9
2,581,264	+				-3.2
2,581,264	+				-1.6
2,581,264	+				-1.5
2,581,265	-				-4.6
2,581,265	-				-4.4
2,581,265	-				-2.9
2,581,280	+				-3.3
2,581,282	+				-5.8
2,581,282	+				-2.9
2,581,283	-				-2.7
2,581,407	+		RR42_RS12040	0.11	-3.2
2,581,416	-		RR42_RS12040	0.11	-1.7
2,581,416	-		RR42_RS12040	0.11	-5.9
2,581,416	-		RR42_RS12040	0.11	-0.2
2,581,416	-		RR42_RS12040	0.11	-1.7
2,581,501	-		RR42_RS12040	0.18	-3.0
2,581,547	+		RR42_RS12040	0.21	-3.2
2,581,577	+		RR42_RS12040	0.24	-2.5
2,581,593	-		RR42_RS12040	0.25	-3.4
2,581,597	+		RR42_RS12040	0.25	-5.1
2,581,717	+		RR42_RS12040	0.34	-1.8
2,581,717	+		RR42_RS12040	0.34	-3.9
2,581,751	+		RR42_RS12040	0.37	-7.0
2,581,812	-		RR42_RS12040	0.41	-2.8
2,581,812	-		RR42_RS12040	0.41	-1.7
2,581,827	+		RR42_RS12040	0.43	-3.4
2,581,919	-		RR42_RS12040	0.50	-2.3
2,581,919	-		RR42_RS12040	0.50	-3.2
2,582,192	+		RR42_RS12040	0.70	-4.9
2,582,252	+		RR42_RS12040	0.75	-4.2
2,582,252	+		RR42_RS12040	0.75	-0.2
2,582,253	-		RR42_RS12040	0.75	-3.7
2,582,253	-		RR42_RS12040	0.75	-5.8
2,582,253	-		RR42_RS12040	0.75	-3.7
2,582,268	-		RR42_RS12040	0.76	-2.0
2,582,303	+		RR42_RS12040	0.79	-3.8
2,582,303	+		RR42_RS12040	0.79	-5.8
2,582,426	+		RR42_RS12040	0.88	-3.0
2,582,427	-		RR42_RS12040	0.88	-1.7
2,582,528	+				-2.0
2,582,529	-				-4.0
2,582,582	+				+0.0
2,582,583	-				+0.3
2,582,583	-				+1.0
2,582,680	+				+1.1
2,583,001	-		RR42_RS12045	0.34	+1.1
2,583,021	+		RR42_RS12045	0.35	-0.0
2,583,021	+		RR42_RS12045	0.35	-1.4
2,583,021	+		RR42_RS12045	0.35	-1.2
2,583,021	+		RR42_RS12045	0.35	-2.4
2,583,103	+		RR42_RS12045	0.42	-0.6