Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11705

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,504,670	+		RR42_RS11695	0.77	-1.5
2,504,671	-		RR42_RS11695	0.77	+1.7
2,504,674	+		RR42_RS11695	0.78	-0.0
2,504,674	+		RR42_RS11695	0.78	+0.6
2,504,674	+		RR42_RS11695	0.78	+1.6
2,504,674	+		RR42_RS11695	0.78	+0.9
2,504,675	-		RR42_RS11695	0.78	-0.1
2,504,675	-		RR42_RS11695	0.78	+1.4
2,504,675	-		RR42_RS11695	0.78	-3.3
2,504,818	-				+0.2
2,504,930	+				-0.4
2,504,931	-				-0.7
2,505,044	-		RR42_RS11700	0.18	-3.5
2,505,044	-		RR42_RS11700	0.18	-0.8
2,505,172	+		RR42_RS11700	0.37	-0.3
2,505,172	+		RR42_RS11700	0.37	-2.0
2,505,172	+		RR42_RS11700	0.37	-2.0
2,505,173	-		RR42_RS11700	0.38	-0.7
2,505,173	-		RR42_RS11700	0.38	-0.3
2,505,173	-		RR42_RS11700	0.38	-1.2
2,505,175	+		RR42_RS11700	0.38	+0.2
2,505,175	+		RR42_RS11700	0.38	+1.4
2,505,266	+		RR42_RS11700	0.52	-0.8
2,505,266	+		RR42_RS11700	0.52	+0.8
2,505,267	-		RR42_RS11700	0.52	-2.3
2,505,267	-		RR42_RS11700	0.52	+0.4
2,505,267	-		RR42_RS11700	0.52	-0.0
2,505,277	+		RR42_RS11700	0.54	+1.3
2,505,277	+		RR42_RS11700	0.54	-2.0
2,505,278	-		RR42_RS11700	0.54	+1.3
2,505,696	+		RR42_RS11705	0.17	+1.2
2,505,774	+		RR42_RS11705	0.39	+1.8
2,505,774	+		RR42_RS11705	0.39	+1.2
2,505,774	+		RR42_RS11705	0.39	+0.2
2,505,774	+		RR42_RS11705	0.39	+0.3
2,505,775	-		RR42_RS11705	0.39	-0.2
2,505,775	-		RR42_RS11705	0.39	+0.5
2,506,180	+				+0.8
2,506,180	+				+2.0
2,506,458	+				-1.0
2,506,459	-				+0.5
2,506,459	-				-0.5
2,506,659	+				-1.0
2,506,660	-				+0.3
2,506,660	-				+0.6
2,506,960	+				-0.5
2,506,961	-				-2.2
2,506,961	-				+0.9
2,506,967	-				-1.2