Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11550

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,469,658	-		RR42_RS11540	0.89	+0.4
2,469,735	+				+0.3
2,469,736	-				-1.5
2,469,777	+				-1.1
2,469,778	-				-0.6
2,469,778	-				-0.4
2,469,791	+				-2.4
2,469,791	+				+0.9
2,469,916	-				-1.3
2,469,988	+				-2.0
2,469,988	+				+0.2
2,469,988	+				+1.1
2,469,989	-				+0.7
2,470,937	+		RR42_RS11550	0.68	-0.4
2,471,084	+		RR42_RS11550	0.88	-0.9
2,471,084	+		RR42_RS11550	0.88	-2.9
2,471,084	+		RR42_RS11550	0.88	-0.6
2,471,256	+				+1.3
2,471,258	+				+1.2
2,471,259	-				-0.6
2,471,307	+				-1.1
2,471,323	+				+1.6
2,471,323	+				-0.8
2,471,535	-		RR42_RS11555	0.23	-0.2
2,471,535	-		RR42_RS11555	0.23	-1.4
2,471,645	+		RR42_RS11555	0.35	-2.1
2,471,645	+		RR42_RS11555	0.35	-0.3
2,471,720	-		RR42_RS11555	0.43	-0.6
2,471,922	+		RR42_RS11555	0.65	+0.2
2,471,999	+		RR42_RS11555	0.73	-1.7
2,471,999	+		RR42_RS11555	0.73	-0.8
2,472,000	-		RR42_RS11555	0.73	+1.3
2,472,000	-		RR42_RS11555	0.73	-2.5
2,472,040	+		RR42_RS11555	0.77	+0.5
2,472,069	-		RR42_RS11555	0.81	-1.0
2,472,162	-				+0.3
2,472,162	-				+0.5
2,472,162	-				+2.0