Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11425

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,444,502	-		RR42_RS11420	0.56	-2.3
2,444,564	-		RR42_RS11420	0.62	-0.4
2,444,578	-		RR42_RS11420	0.64	+0.9
2,444,623	-		RR42_RS11420	0.68	+0.3
2,444,623	-		RR42_RS11420	0.68	+0.1
2,444,624	-		RR42_RS11420	0.68	+0.4
2,444,878	+				+0.6
2,444,879	-				+0.2
2,444,879	-				+0.7
2,444,879	-				+0.4
2,445,019	-				+0.2
2,445,019	-				-0.5
2,445,019	-				+0.1
2,445,398	-				-3.3
2,445,413	-				-0.9
2,445,484	+				+0.0
2,445,484	+				-1.8
2,445,485	-				-0.1
2,445,485	-				-1.2
2,445,682	+		RR42_RS11425	0.50	-0.1
2,445,759	-		RR42_RS11425	0.68	+1.2
2,445,809	-		RR42_RS11425	0.79	+2.0
2,445,877	+				-0.2
2,445,878	-				-1.1
2,446,002	-				-1.2
2,446,002	-				+0.7
2,446,002	-				-0.7
2,446,149	+				-0.1
2,446,149	+				-0.4
2,446,150	-				-0.9
2,446,150	-				-0.5
2,446,150	-				-0.7
2,446,251	+				-1.3
2,446,252	-				+2.3
2,446,579	+				-0.7
2,446,580	-				+1.3
2,446,624	+				-2.2
2,446,625	-				-2.3
2,446,625	-				+0.3
2,446,769	-		RR42_RS11435	0.15	-0.4
2,446,862	+		RR42_RS11435	0.25	-1.2
2,446,863	-		RR42_RS11435	0.25	+1.6