Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11395

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,438,794	-				+0.7
2,438,967	-		RR42_RS11390	0.23	-3.2
2,439,276	-		RR42_RS11390	0.71	+0.1
2,439,437	+				+0.1
2,439,458	+				-0.4
2,439,476	-				-0.7
2,439,487	-				+0.8
2,439,493	+				+0.8
2,439,494	-				-0.8
2,439,494	-				-1.2
2,439,494	-				+0.9
2,439,494	-				+0.6
2,439,495	+				-0.8
2,439,495	+				-2.6
2,439,495	+				+0.5
2,439,496	-				-0.2
2,439,496	-				+1.2
2,439,671	+				-0.4
2,439,672	-				-0.2
2,439,797	-				-0.1
2,439,804	+				-0.0
2,439,805	-				+0.4
2,439,805	-				+1.6
2,439,807	+		RR42_RS11395	0.10	+1.8
2,439,808	-		RR42_RS11395	0.10	-0.2
2,440,043	-		RR42_RS11395	0.36	-1.5
2,440,107	+		RR42_RS11395	0.43	-0.3
2,440,204	+		RR42_RS11395	0.54	+0.2
2,440,240	+		RR42_RS11395	0.58	-0.9
2,440,241	-		RR42_RS11395	0.58	-0.1
2,440,629	+				-0.2
2,440,629	+				+0.7
2,440,672	-				-0.9
2,440,672	-				-0.4
2,440,672	-				+0.3
2,440,742	+				+0.9
2,440,749	+				+0.9
2,440,750	-				-1.6
2,440,750	-				-1.4
2,440,762	+				+0.6
2,440,763	-				-0.1
2,440,771	+				-0.1
2,440,771	+				-1.3
2,440,772	-				-1.3
2,440,940	+				-0.7
2,440,940	+				-1.5
2,440,940	+				-1.2
2,440,941	-				-1.5
2,440,974	+		RR42_RS11400	0.11	-2.2
2,440,975	-		RR42_RS11400	0.12	+1.7
2,441,070	-		RR42_RS11400	0.19	+0.1
2,441,422	+		RR42_RS11400	0.49	-0.6
2,441,423	-		RR42_RS11400	0.49	-0.9
2,441,423	-		RR42_RS11400	0.49	-3.4
2,441,524	+		RR42_RS11400	0.57	-0.5
2,441,524	+		RR42_RS11400	0.57	-0.1
2,441,525	-		RR42_RS11400	0.57	+0.8
2,441,525	-		RR42_RS11400	0.57	+0.6
2,441,568	+		RR42_RS11400	0.61	+0.4
2,441,568	+		RR42_RS11400	0.61	-0.3
2,441,569	-		RR42_RS11400	0.61	+1.2
2,441,569	-		RR42_RS11400	0.61	+0.2