Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11105

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,370,360	+		RR42_RS11100	0.50	+0.3
2,370,360	+		RR42_RS11100	0.50	-0.5
2,370,360	+		RR42_RS11100	0.50	+0.5
2,370,360	+		RR42_RS11100	0.50	+1.3
2,370,399	+		RR42_RS11100	0.53	-0.3
2,370,400	-		RR42_RS11100	0.53	+1.3
2,370,400	-		RR42_RS11100	0.53	-1.1
2,370,552	+		RR42_RS11100	0.63	-0.4
2,370,552	+		RR42_RS11100	0.63	-0.2
2,370,553	-		RR42_RS11100	0.63	+0.7
2,370,553	-		RR42_RS11100	0.63	+0.4
2,370,553	-		RR42_RS11100	0.63	-0.7
2,370,553	-		RR42_RS11100	0.63	+0.4
2,370,553	-		RR42_RS11100	0.63	-2.0
2,370,714	+		RR42_RS11100	0.74	-1.6
2,370,715	-		RR42_RS11100	0.74	-0.5
2,370,753	-		RR42_RS11100	0.76	-0.9
2,370,816	+		RR42_RS11100	0.80	+2.0
2,370,817	-		RR42_RS11100	0.80	+0.2
2,370,817	-		RR42_RS11100	0.80	+0.1
2,370,817	-		RR42_RS11100	0.80	-1.9
2,370,963	+		RR42_RS11100	0.90	+0.8
2,370,963	+		RR42_RS11100	0.90	+0.5
2,370,963	+		RR42_RS11100	0.90	+0.4
2,370,963	+		RR42_RS11100	0.90	-2.0
2,370,964	-		RR42_RS11100	0.90	+1.4
2,370,964	-		RR42_RS11100	0.90	+1.7
2,371,036	-				+1.0
2,371,044	-				-1.4
2,371,189	-				+0.0
2,371,273	+				+0.8
2,371,321	+				+0.7
2,371,322	-				-0.9
2,371,438	-		RR42_RS11105	0.11	-0.3
2,371,438	-		RR42_RS11105	0.11	-0.4
2,371,438	-		RR42_RS11105	0.11	+0.9
2,371,638	+		RR42_RS11105	0.26	-0.2
2,371,638	+		RR42_RS11105	0.26	-0.2
2,371,638	+				-0.2
2,371,638	+		RR42_RS11105	0.26	+0.4
2,371,638	+		RR42_RS11105	0.26	+0.6
2,371,639	-		RR42_RS11105	0.26	-0.9
2,371,639	-		RR42_RS11105	0.26	+0.9
2,371,639	-		RR42_RS11105	0.26	+1.1
2,371,685	+		RR42_RS11105	0.30	+1.7
2,371,685	+		RR42_RS11105	0.30	+0.9
2,371,686	-		RR42_RS11105	0.30	-1.1
2,371,686	-		RR42_RS11105	0.30	-0.4
2,371,883	+		RR42_RS11105	0.45	-0.5
2,371,884	-		RR42_RS11105	0.45	-1.4
2,371,884	-		RR42_RS11105	0.45	+0.1
2,371,929	-		RR42_RS11105	0.49	+0.2
2,371,952	+		RR42_RS11105	0.51	-0.6
2,371,963	+		RR42_RS11105	0.52	+1.3
2,371,964	-		RR42_RS11105	0.52	-1.5
2,371,964	-		RR42_RS11105	0.52	-0.8
2,371,964	-		RR42_RS11105	0.52	+0.3
2,372,205	+		RR42_RS11105	0.70	+0.4
2,372,556	-				-0.5
2,372,584	+				+0.2
2,372,584	+				+0.1
2,372,584	+				+0.8
2,372,585	-				+0.0
2,372,601	+				+0.4
2,372,601	+				+0.3
2,372,610	+				-0.9
2,373,259	+		RR42_RS11110	0.25	-1.8
2,373,259	+		RR42_RS11110	0.25	-1.5
2,373,260	-		RR42_RS11110	0.25	-2.3
2,373,260	-		RR42_RS11110	0.25	-0.8
2,373,314	+		RR42_RS11110	0.30	-1.7
2,373,315	-		RR42_RS11110	0.31	-0.7
2,373,379	+		RR42_RS11110	0.37	+1.5
2,373,380	-		RR42_RS11110	0.37	-2.0
2,373,539	-		RR42_RS11110	0.54	+0.2