Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11070

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,361,157	+				+0.1
2,361,157	+				-1.5
2,361,157	+				+0.6
2,361,157	+				+0.7
2,361,157	+				+1.1
2,361,158	-				-1.8
2,361,158	-				-2.4
2,361,158	-				-2.7
2,361,262	-				+0.4
2,361,313	+				-1.2
2,361,482	+		RR42_RS11065	0.33	+1.3
2,361,482	+		RR42_RS11065	0.33	+2.3
2,361,482	+		RR42_RS11065	0.33	-2.7
2,361,787	-				-0.3
2,361,787	-				+1.3
2,361,804	-				+1.0
2,361,804	-				-1.0
2,361,871	+				+0.3
2,361,871	+				-0.7
2,361,871	+				-2.2
2,361,872	-				-0.2
2,361,872	-				+0.5
2,361,873	+				+0.2
2,362,156	+		RR42_RS11070	0.37	-3.7
2,362,156	+		RR42_RS11070	0.37	+0.4
2,362,156	+		RR42_RS11070	0.37	-0.4
2,362,157	-		RR42_RS11070	0.37	-0.6
2,362,157	-		RR42_RS11070	0.37	-0.3
2,362,744	-				-0.8
2,362,820	+				-2.9
2,362,821	-				-0.0
2,363,250	-		RR42_RS11075	0.28	+0.2
2,363,250	-		RR42_RS11075	0.28	+0.8
2,363,453	+		RR42_RS11075	0.39	+1.3
2,363,453	+		RR42_RS11075	0.39	+1.4
2,363,453	+		RR42_RS11075	0.39	-2.2
2,363,454	-		RR42_RS11075	0.39	-1.1
2,363,454	-		RR42_RS11075	0.39	-0.3
2,363,454	-		RR42_RS11075	0.39	+0.5
2,363,600	+		RR42_RS11075	0.47	-0.9
2,363,600	+		RR42_RS11075	0.47	-0.7
2,363,601	-		RR42_RS11075	0.47	+1.4
2,363,601	-		RR42_RS11075	0.47	-0.5
2,363,652	+		RR42_RS11075	0.50	-0.2
2,363,652	+		RR42_RS11075	0.50	-0.6