Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10960

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,340,157	+				-1.4
2,340,234	+				+0.1
2,340,279	+				-0.1
2,340,282	+				+0.1
2,340,373	-				-0.3
2,340,418	-		RR42_RS10955	0.15	+1.0
2,340,560	+		RR42_RS10955	0.34	-0.4
2,340,560	+		RR42_RS10955	0.34	+0.6
2,340,561	-		RR42_RS10955	0.34	+2.0
2,340,818	+		RR42_RS10955	0.68	+0.3
2,340,819	-		RR42_RS10955	0.68	+0.2
2,340,847	+		RR42_RS10955	0.72	-1.1
2,340,964	+		RR42_RS10955	0.88	+2.1
2,340,964	+		RR42_RS10955	0.88	+0.1
2,340,965	-		RR42_RS10955	0.88	-3.9
2,340,965	-		RR42_RS10955	0.88	-0.7
2,340,965	-		RR42_RS10955	0.88	+0.9
2,340,965	-		RR42_RS10955	0.88	+1.7
2,340,965	-		RR42_RS10955	0.88	+1.2
2,340,965	-		RR42_RS10955	0.88	+0.2
2,340,965	-		RR42_RS10955	0.88	-0.9
2,340,965	-		RR42_RS10955	0.88	+1.8
2,340,965	-		RR42_RS10955	0.88	+0.6
2,340,965	-		RR42_RS10955	0.88	-0.8
2,340,968	+		RR42_RS10955	0.88	+0.4
2,340,968	+		RR42_RS10955	0.88	+0.3
2,340,968	+		RR42_RS10955	0.88	-0.6
2,340,968	+		RR42_RS10955	0.88	-1.7
2,340,968	+		RR42_RS10955	0.88	-0.1
2,340,969	-		RR42_RS10955	0.88	+0.8
2,340,969	-		RR42_RS10955	0.88	+0.6
2,340,969	-		RR42_RS10955	0.88	+1.8
2,341,181	+				+0.5
2,341,181	+				+0.6
2,341,181	+				+1.4
2,341,181	+				-1.5
2,341,181	+				+1.5
2,341,182	-				-0.2
2,341,182	-				+0.2
2,341,532	-		RR42_RS10960	0.48	-0.6
2,341,532	-		RR42_RS10960	0.48	+0.1
2,341,532	-		RR42_RS10960	0.48	-2.4
2,341,576	+		RR42_RS10960	0.53	-2.5
2,341,648	-		RR42_RS10960	0.61	+2.5
2,341,711	+		RR42_RS10960	0.68	-0.1
2,341,711	+		RR42_RS10960	0.68	-0.3
2,341,712	-		RR42_RS10960	0.68	+1.2
2,341,770	+		RR42_RS10960	0.75	-0.3
2,341,771	-		RR42_RS10960	0.75	+0.2
2,341,786	+		RR42_RS10960	0.77	-2.8
2,341,786	+		RR42_RS10960	0.77	+0.8
2,341,809	+		RR42_RS10960	0.79	-2.6
2,341,955	+				-0.9
2,341,955	+				+0.6
2,341,956	-				-0.1
2,341,956	-				+0.3
2,341,956	-				+0.2
2,341,956	-				-2.7
2,342,290	-		RR42_RS10965	0.22	-0.0
2,342,325	-		RR42_RS10965	0.24	+0.6
2,342,644	+		RR42_RS10965	0.49	+0.7
2,342,663	+		RR42_RS10965	0.50	+0.9
2,342,663	+		RR42_RS10965	0.50	+0.4
2,342,663	+		RR42_RS10965	0.50	-1.7
2,342,663	+		RR42_RS10965	0.50	-1.1
2,342,664	-		RR42_RS10965	0.50	-0.2
2,342,977	-		RR42_RS10965	0.74	-1.2