Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09920

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,116,230	+		RR42_RS09915	0.47	+0.1
2,116,306	-		RR42_RS09915	0.53	-0.7
2,116,355	+		RR42_RS09915	0.57	-1.0
2,116,355	+		RR42_RS09915	0.57	-2.3
2,116,355	+		RR42_RS09915	0.57	+0.2
2,116,356	-		RR42_RS09915	0.57	+0.1
2,116,412	+		RR42_RS09915	0.62	-0.8
2,116,836	+				+0.9
2,116,837	-				-2.7
2,116,838	+				-1.7
2,116,838	+				+0.8
2,116,838	+				-0.4
2,116,839	-				+0.6
2,117,060	-				+0.3
2,117,417	-		RR42_RS09920	0.41	-0.1
2,117,458	+		RR42_RS09920	0.48	-0.7
2,117,458	+		RR42_RS09920	0.48	-0.1
2,117,478	-		RR42_RS09920	0.51	+0.2
2,117,530	+		RR42_RS09920	0.59	+0.5
2,117,543	+		RR42_RS09920	0.61	-0.2
2,117,544	-		RR42_RS09920	0.61	-2.8
2,117,612	+		RR42_RS09920	0.71	-2.7
2,117,613	-		RR42_RS09920	0.71	-0.7
2,117,733	-				+0.1
2,117,733	-				-1.3
2,117,849	+				-0.5
2,117,850	-				-2.7
2,117,896	+				+0.2
2,117,993	+				+0.7
2,117,993	+				+0.3
2,117,993	+				-0.4
2,117,994	-				+1.0
2,117,996	+				-1.0
2,117,996	+				+1.0
2,117,996	+				+1.5
2,117,997	-				-0.8
2,117,997	-				-0.1
2,117,997	-				+0.5
2,117,997	-				-0.8
2,117,997	-				-0.1
2,117,997	-				+0.6
2,117,997	-				-0.1
2,118,005	+				-1.2
2,118,118	-				-0.4
2,118,339	-		RR42_RS09925	0.45	+2.0
2,118,488	+				-1.2
2,118,573	+				+0.2
2,118,573	+		RR42_RS09930	0.24	+0.9
2,118,574	-		RR42_RS09930	0.24	-0.7
2,118,727	-		RR42_RS09930	0.61	+0.5
2,118,727	-		RR42_RS09930	0.61	+2.2
2,118,786	+		RR42_RS09930	0.75	+1.0