Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09460

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
2,006,255	-		RR42_RS09450	0.85	+0.6
2,006,478	+				+1.0
2,006,479	-				-0.9
2,006,479	-				+0.5
2,006,479	-				+0.1
2,006,512	+				+1.1
2,006,512	+				-0.2
2,006,545	+				+0.1
2,006,546	-				-0.5
2,006,576	+		RR42_RS09455	0.11	+1.7
2,006,795	-		RR42_RS09455	0.51	+0.1
2,006,879	+		RR42_RS09455	0.66	+1.0
2,006,879	+		RR42_RS09455	0.66	+1.1
2,006,880	-		RR42_RS09455	0.66	-0.5
2,006,974	+		RR42_RS09455	0.84	+0.6
2,006,974	+		RR42_RS09455	0.84	+0.6
2,006,974	+		RR42_RS09455	0.84	-0.3
2,006,975	-		RR42_RS09455	0.84	+0.5
2,006,975	-		RR42_RS09455	0.84	+0.4
2,006,975	-		RR42_RS09455	0.84	-0.2
2,006,975	-		RR42_RS09455	0.84	+1.0
2,006,975	-		RR42_RS09455	0.84	+1.5
2,007,000	-		RR42_RS09455	0.88	-1.9
2,007,012	+				-0.3
2,007,012	+				+1.2
2,007,012	+				-0.2
2,007,012	+				-0.4
2,007,012	+				+0.8
2,007,013	-				-1.3
2,007,111	+				-0.1
2,007,587	-		RR42_RS09460	0.46	+0.5
2,007,587	-		RR42_RS09460	0.46	-0.4
2,007,621	-		RR42_RS09460	0.50	+1.2
2,007,703	+		RR42_RS09460	0.60	+0.2
2,007,704	-		RR42_RS09460	0.60	+0.9
2,007,841	+		RR42_RS09460	0.77	+1.6
2,007,841	+		RR42_RS09460	0.77	-0.3
2,007,841	+		RR42_RS09460	0.77	-2.1
2,007,842	-		RR42_RS09460	0.77	-1.6
2,007,842	-		RR42_RS09460	0.77	+1.5
2,007,842	-		RR42_RS09460	0.77	+0.8
2,007,842	-		RR42_RS09460	0.77	-0.3
2,007,842	-		RR42_RS09460	0.77	+0.4
2,007,923	+		RR42_RS09460	0.87	-1.3
2,007,923	+		RR42_RS09460	0.87	-0.2
2,007,924	-		RR42_RS09460	0.87	-1.0
2,007,964	+				+0.3
2,008,065	-				-0.1
2,008,082	+				+1.2
2,008,083	-				-0.5
2,008,572	+		RR42_RS09465	0.47	+0.3
2,008,572	+		RR42_RS09465	0.47	+0.7
2,008,572	+		RR42_RS09465	0.47	+0.8
2,008,573	-		RR42_RS09465	0.47	+0.6
2,008,573	-		RR42_RS09465	0.47	+1.5
2,008,573	-		RR42_RS09465	0.47	+1.0
2,008,694	-		RR42_RS09465	0.59	+0.5
2,008,800	-		RR42_RS09465	0.70	-0.8
2,008,811	-		RR42_RS09465	0.71	-0.8
2,008,823	-		RR42_RS09465	0.72	+0.4
2,008,823	-		RR42_RS09465	0.72	+0.4
2,008,823	-		RR42_RS09465	0.72	+1.2
2,008,854	+		RR42_RS09465	0.76	+1.1
2,008,854	+		RR42_RS09465	0.76	+0.0
2,008,854	+		RR42_RS09465	0.76	+0.6
2,008,854	+		RR42_RS09465	0.76	-1.3
2,008,855	-		RR42_RS09465	0.76	-0.7
2,008,855	-		RR42_RS09465	0.76	-1.3