Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09405

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,992,309	+		RR42_RS09400	0.34	+0.8
1,992,309	+		RR42_RS09400	0.34	-3.1
1,992,359	-		RR42_RS09400	0.38	+0.5
1,992,425	+		RR42_RS09400	0.44	+0.6
1,992,426	-		RR42_RS09400	0.44	-0.0
1,992,426	-		RR42_RS09400	0.44	+1.1
1,992,438	+		RR42_RS09400	0.45	+0.8
1,992,510	+		RR42_RS09400	0.51	+0.8
1,992,525	+		RR42_RS09400	0.52	-0.3
1,992,526	-		RR42_RS09400	0.52	-2.4
1,992,526	-		RR42_RS09400	0.52	-0.3
1,992,645	+		RR42_RS09400	0.63	+0.8
1,992,645	+		RR42_RS09400	0.63	-3.1
1,992,879	+		RR42_RS09400	0.83	-1.7
1,993,051	+				-0.8
1,993,089	-				-1.5
1,993,089	-				-0.8
1,993,089	-				+1.3
1,993,430	+		RR42_RS09405	0.17	+0.0
1,993,430	+		RR42_RS09405	0.17	-1.1
1,993,431	-		RR42_RS09405	0.17	-2.1
1,993,466	-		RR42_RS09405	0.20	-1.3
1,993,605	-		RR42_RS09405	0.33	-1.7
1,993,901	+		RR42_RS09405	0.61	+0.5
1,993,902	-		RR42_RS09405	0.61	+1.1
1,994,009	+		RR42_RS09405	0.71	-2.6
1,994,189	+		RR42_RS09405	0.88	+0.9
1,994,189	+		RR42_RS09405	0.88	-0.7
1,994,189	+		RR42_RS09405	0.88	-1.2
1,994,190	-		RR42_RS09405	0.88	-0.8
1,994,240	-				-2.1
1,994,272	+				-0.8
1,994,272	+				-0.1
1,994,272	+				+0.5
1,994,273	-				+0.7
1,994,273	-				+0.3
1,994,372	+				-0.4
1,994,373	-				+1.1
1,994,572	-				+1.9
1,994,752	+				+0.7
1,994,765	-				-0.2
1,995,042	+		RR42_RS09410	0.16	-2.6
1,995,043	-		RR42_RS09410	0.16	-2.8
1,995,235	+		RR42_RS09410	0.26	+0.0