Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07910

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,696,870	+		RR42_RS07905	0.56	+2.3
1,696,966	+		RR42_RS07905	0.68	+3.3
1,696,966	+		RR42_RS07905	0.68	+0.1
1,696,967	-		RR42_RS07905	0.68	-1.4
1,697,125	+		RR42_RS07905	0.87	-0.1
1,697,125	+		RR42_RS07905	0.87	+2.3
1,697,126	-		RR42_RS07905	0.87	-1.5
1,697,126	-		RR42_RS07905	0.87	-0.4
1,697,126	-		RR42_RS07905	0.87	-3.6
1,697,135	+		RR42_RS07905	0.88	+1.9
1,697,176	+				+0.6
1,697,176	+				+0.7
1,697,176	+				-0.6
1,697,177	-				+0.8
1,697,177	-				+0.8
1,697,177	-				-0.1
1,697,179	+				-0.6
1,697,180	-				-0.8
1,697,219	-				+0.7
1,697,219	-				-2.7
1,697,219	-				-1.1
1,697,264	+				-1.7
1,697,276	-				-2.7
1,697,276	-				-0.2
1,697,439	+				+0.5
1,697,439	+				+0.1
1,697,440	-				-0.5
1,697,440	-				+1.4
1,697,440	-				+0.2
1,697,440	-				-0.4
1,697,440	-				-0.9
1,697,440	-				-0.4
1,697,507	-				-1.0
1,697,754	+				+0.4
1,697,761	+				-1.7
1,697,761	+				-0.6
1,697,762	-				+0.2
1,698,176	-		RR42_RS07910	0.34	-0.8
1,698,176	-		RR42_RS07910	0.34	+0.0
1,698,176	-		RR42_RS07910	0.34	+0.3
1,698,176	-		RR42_RS07910	0.34	-0.9
1,698,176	-		RR42_RS07910	0.34	-3.3
1,698,227	-		RR42_RS07910	0.38	-1.0
1,698,359	-		RR42_RS07910	0.49	-0.9
1,698,773	-		RR42_RS07910	0.84	-1.0
1,699,033	+				+0.8
1,699,163	+				-0.1
1,699,164	-				+0.4
1,699,164	-				-0.1
1,699,380	-		RR42_RS07915	0.13	+0.7
1,699,402	+		RR42_RS07915	0.14	+0.2
1,699,402	+		RR42_RS07915	0.14	-0.5
1,699,414	+		RR42_RS07915	0.14	-1.1
1,699,414	+		RR42_RS07915	0.14	+0.5
1,699,441	+		RR42_RS07915	0.15	+1.7
1,699,441	+		RR42_RS07915	0.15	-0.1
1,699,442	-		RR42_RS07915	0.15	-1.2
1,699,442	-		RR42_RS07915	0.15	+0.9
1,699,543	+		RR42_RS07915	0.18	-1.5
1,699,543	+		RR42_RS07915	0.18	-2.9
1,699,544	-		RR42_RS07915	0.18	+0.7
1,699,544	-		RR42_RS07915	0.18	-0.4
1,699,544	-		RR42_RS07915	0.18	-0.3
1,699,777	+		RR42_RS07915	0.26	+2.1
1,699,778	-		RR42_RS07915	0.26	+2.1
1,699,786	+		RR42_RS07915	0.26	-2.7
1,699,787	-		RR42_RS07915	0.26	-0.9