Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07845

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,680,469	-		RR42_RS07840	0.41	+0.5
1,680,705	+		RR42_RS07840	0.60	+0.1
1,680,706	-		RR42_RS07840	0.60	+2.3
1,680,706	-		RR42_RS07840	0.60	+1.5
1,680,751	-		RR42_RS07840	0.64	+0.6
1,680,751	-		RR42_RS07840	0.64	-1.1
1,680,751	-		RR42_RS07840	0.64	-3.7
1,680,922	+		RR42_RS07840	0.78	-1.8
1,681,011	+		RR42_RS07840	0.86	+2.1
1,681,012	-		RR42_RS07840	0.86	-0.8
1,681,012	-		RR42_RS07840	0.86	+0.7
1,681,012	-		RR42_RS07840	0.86	+0.6
1,681,101	+				-2.0
1,681,101	+				+0.1
1,681,101	+				-0.2
1,681,102	-				-0.1
1,681,102	-				+0.7
1,681,222	+				-0.2
1,681,222	+				+0.2
1,681,223	-				+0.6
1,681,223	-				-0.4
1,681,721	+		RR42_RS07845	0.10	+0.0
1,681,722	-		RR42_RS07845	0.10	-2.0
1,681,878	-		RR42_RS07845	0.15	-1.5
1,681,970	+		RR42_RS07845	0.17	+0.7
1,681,971	-		RR42_RS07845	0.17	-1.7
1,682,063	+		RR42_RS07845	0.20	+0.6
1,682,064	-		RR42_RS07845	0.20	-0.3
1,682,064	-		RR42_RS07845	0.20	-1.2
1,682,069	+		RR42_RS07845	0.20	+0.5
1,682,069	+		RR42_RS07845	0.20	+1.0
1,682,069	+		RR42_RS07845	0.20	+0.9
1,682,069	+		RR42_RS07845	0.20	-1.8
1,682,069	+		RR42_RS07845	0.20	+0.4
1,682,363	+		RR42_RS07845	0.29	-0.8
1,682,363	+		RR42_RS07845	0.29	-1.0
1,682,363	+		RR42_RS07845	0.29	-2.5
1,683,033	-		RR42_RS07845	0.48	-0.4
1,683,033	-		RR42_RS07845	0.48	-0.9
1,683,033	-		RR42_RS07845	0.48	-0.9
1,683,086	+		RR42_RS07845	0.50	-0.3
1,683,086	+		RR42_RS07845	0.50	-2.5
1,683,086	+		RR42_RS07845	0.50	-1.2
1,683,086	+		RR42_RS07845	0.50	-0.4
1,683,087	-		RR42_RS07845	0.50	-2.9
1,683,243	-		RR42_RS07845	0.54	-0.7
1,683,243	-		RR42_RS07845	0.54	-0.8
1,683,243	-		RR42_RS07845	0.54	+0.4
1,683,455	+		RR42_RS07845	0.60	-0.5
1,683,578	+		RR42_RS07845	0.64	-2.4
1,683,578	+		RR42_RS07845	0.64	-2.3
1,683,578	+		RR42_RS07845	0.64	-0.9
1,683,578	+		RR42_RS07845	0.64	+0.1
1,683,578	+		RR42_RS07845	0.64	-2.4
1,683,579	-		RR42_RS07845	0.64	-1.8
1,683,903	-		RR42_RS07845	0.73	-1.0
1,683,987	-		RR42_RS07845	0.76	-0.2
1,684,028	+		RR42_RS07845	0.77	+4.5
1,684,028	+		RR42_RS07845	0.77	-2.2
1,684,028	+		RR42_RS07845	0.77	-1.5
1,684,028	+		RR42_RS07845	0.77	-0.4
1,684,028	+		RR42_RS07845	0.77	+0.9
1,684,029	-		RR42_RS07845	0.77	-0.8
1,684,029	-		RR42_RS07845	0.77	+1.0
1,684,029	-		RR42_RS07845	0.77	+0.9
1,684,032	-		RR42_RS07845	0.77	-1.3
1,684,073	+		RR42_RS07845	0.78	-1.1
1,684,073	+		RR42_RS07845	0.78	-0.7
1,684,073	+		RR42_RS07845	0.78	-3.5
1,684,074	-		RR42_RS07845	0.78	-1.4
1,684,322	+		RR42_RS07845	0.85	+0.3
1,684,430	+		RR42_RS07845	0.88	-2.5
1,684,431	-		RR42_RS07845	0.88	-1.5
1,684,431	-		RR42_RS07845	0.88	+1.2
1,684,431	-		RR42_RS07845	0.88	-2.4
1,684,464	-		RR42_RS07845	0.89	-1.5
1,684,767	+				+2.0
1,684,768	-				-1.1
1,684,768	-				-0.4
1,684,769	+				+1.2
1,684,770	-				-1.2
1,685,002	+				+2.1
1,685,002	+				+0.6
1,685,003	-				+0.0
1,685,006	-				-0.1
1,685,007	+				-1.4
1,685,007	+				-2.7
1,685,007	+				+0.3
1,685,008	-				-0.1
1,685,008	-				+1.0
1,685,107	+				-0.2
1,685,107	+				-2.7