Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07760
Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM |
---|---|---|---|---|---|
remove | |||||
1,661,139 | + | RR42_RS07755 | 0.58 | -2.5 | |
1,661,286 | + | RR42_RS07755 | 0.65 | -4.5 | |
1,661,340 | + | RR42_RS07755 | 0.67 | -2.7 | |
1,661,340 | + | RR42_RS07755 | 0.67 | -1.3 | |
1,661,340 | + | RR42_RS07755 | 0.67 | -1.5 | |
1,661,494 | - | RR42_RS07755 | 0.74 | -2.2 | |
1,661,496 | + | RR42_RS07755 | 0.74 | -1.0 | |
1,661,865 | + | -0.0 | |||
1,661,866 | - | -1.1 | |||
1,661,892 | - | -0.2 | |||
1,661,987 | + | -0.4 | |||
1,661,988 | - | +1.9 | |||
1,661,988 | - | +0.2 | |||
1,662,054 | + | +0.1 | |||
1,662,054 | + | -1.3 | |||
1,662,054 | + | -0.5 | |||
1,662,055 | - | -2.5 | |||
1,662,055 | - | +0.8 | |||
1,662,138 | + | -1.9 | |||
1,662,139 | - | RR42_RS07760 | 0.10 | -1.3 | |
1,662,538 | - | RR42_RS07760 | 0.51 | -0.3 | |
1,662,735 | + | RR42_RS07760 | 0.71 | -0.0 | |
1,662,929 | - | +0.5 | |||
1,663,316 | + | -0.2 | |||
1,663,412 | + | +1.4 | |||
1,663,412 | + | -0.2 | |||
1,663,476 | - | +0.4 | |||
1,663,476 | - | -0.3 | |||
1,663,606 | + | +0.3 | |||
1,663,607 | - | -0.6 | |||
1,663,674 | + | +1.1 | |||
1,663,675 | - | -1.5 | |||
1,663,724 | + | +0.6 | |||
1,663,725 | - | -0.5 | |||
1,663,914 | + | +0.6 | |||
1,663,914 | + | +0.1 | |||
1,663,927 | + | +0.1 | |||
1,664,011 | - | -0.1 |
Or see this region's nucleotide sequence