Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05590

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,230,369	+		RR42_RS05580	0.73	-1.3
1,230,631	-		RR42_RS05585	0.20	-0.5
1,230,671	-		RR42_RS05585	0.27	-1.3
1,230,742	+		RR42_RS05585	0.38	-0.5
1,230,871	+		RR42_RS05585	0.59	+0.3
1,230,921	+		RR42_RS05585	0.67	+0.9
1,230,922	-		RR42_RS05585	0.67	-0.3
1,231,115	+				+0.1
1,231,126	+				+0.7
1,231,126	+				+0.5
1,231,236	-				+0.5
1,231,236	-				-2.6
1,231,236	-				+2.4
1,231,279	+				+0.0
1,231,280	-				+0.3
1,231,280	-				-1.0
1,231,334	+				+1.5
1,231,334	+				-0.2
1,231,334	+				-1.0
1,231,335	-				-2.2
1,231,335	-				+0.1
1,231,335	-				-3.2
1,231,335	-				-0.8
1,231,336	+				-0.5
1,231,336	+				-0.6
1,231,336	+				-2.2
1,231,337	-				-1.0
1,231,337	-				+0.5
1,231,682	+		RR42_RS05590	0.71	-0.3
1,231,682	+		RR42_RS05590	0.71	+1.0
1,231,683	-		RR42_RS05590	0.72	+0.7
1,231,683	-		RR42_RS05590	0.72	+0.1
1,231,812	+				+0.6
1,231,812	+				+0.3
1,231,812	+				+1.0
1,231,814	-				-2.0
1,231,858	+				+0.5
1,231,862	+				+1.2
1,231,863	-				-1.6
1,231,918	+				-1.3
1,231,918	+				+0.6
1,231,918	+				+2.4
1,231,919	-				-1.8
1,231,919	-				-0.7
1,232,095	+		RR42_RS05595	0.16	+0.2
1,232,095	+		RR42_RS05595	0.16	-3.5
1,232,095	+		RR42_RS05595	0.16	-1.0
1,232,096	-		RR42_RS05595	0.16	-3.1
1,232,130	+		RR42_RS05595	0.19	-1.8
1,232,216	-		RR42_RS05595	0.26	-1.6
1,232,239	+		RR42_RS05595	0.28	+1.1
1,232,240	-		RR42_RS05595	0.28	-1.8
1,232,243	-		RR42_RS05595	0.28	-0.2
1,232,362	+		RR42_RS05595	0.38	+1.4
1,232,363	-		RR42_RS05595	0.38	-1.0
1,232,363	-		RR42_RS05595	0.38	-2.8
1,232,363	-		RR42_RS05595	0.38	-1.0
1,232,627	-		RR42_RS05595	0.60	-2.2