Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04870

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,081,165	+		RR42_RS04860	0.35	-0.2
1,081,166	-		RR42_RS04860	0.35	+0.3
1,081,231	-		RR42_RS04860	0.56	-0.0
1,081,282	+		RR42_RS04860	0.73	-0.5
1,081,283	-		RR42_RS04860	0.74	-1.0
1,081,423	+		RR42_RS04865	0.14	-0.3
1,081,439	+		RR42_RS04865	0.18	-0.0
1,081,573	+		RR42_RS04865	0.53	+0.2
1,081,574	-		RR42_RS04865	0.54	-0.3
1,081,580	-		RR42_RS04865	0.55	-0.7
1,081,580	-		RR42_RS04865	0.55	-0.2
1,081,580	-		RR42_RS04865	0.55	+1.2
1,081,580	-		RR42_RS04865	0.55	-1.0
1,081,612	+		RR42_RS04865	0.64	-2.0
1,081,612	+		RR42_RS04865	0.64	+3.5
1,081,612	+		RR42_RS04865	0.64	-2.3
1,081,612	+		RR42_RS04865	0.64	+0.5
1,081,612	+		RR42_RS04865	0.64	-0.1
1,081,613	-		RR42_RS04865	0.64	-2.2
1,081,642	+		RR42_RS04865	0.72	+0.6
1,081,642	+		RR42_RS04865	0.72	-0.0
1,081,642	+		RR42_RS04865	0.72	-0.2
1,081,643	-		RR42_RS04865	0.72	+1.0
1,081,643	-		RR42_RS04865	0.72	-0.1
1,081,643	-		RR42_RS04865	0.72	-0.1
1,081,667	-		RR42_RS04865	0.78	-2.9
1,081,720	-				+0.3
1,081,802	+				+0.9
1,081,827	+				+0.7
1,081,827	+				+0.3
1,081,828	-				+1.0
1,081,828	-				+0.2
1,081,961	-				-2.3
1,081,961	-				-0.1
1,082,052	+				+0.4
1,082,052	+				+0.5
1,082,052	+				-1.8
1,082,052	+				+1.2
1,082,053	-				+1.9
1,082,053	-				-1.5
1,082,149	+				-1.0
1,082,149	+				+1.3
1,082,149	+				+3.1
1,082,149	+				+0.3
1,082,150	-				+0.5
1,082,150	-				-0.9
1,082,152	+				-0.5
1,082,152	+				-1.5
1,082,152	+				-2.5
1,082,153	-				-3.0
1,082,153	-				+0.2
1,082,153	-				+0.1
1,082,357	+		RR42_RS04875	0.22	+0.5
1,082,357	+		RR42_RS04875	0.22	-2.3
1,082,394	-		RR42_RS04875	0.29	-0.5
1,082,394	-		RR42_RS04875	0.29	+1.3
1,082,394	-		RR42_RS04875	0.29	+0.3
1,082,394	-		RR42_RS04875	0.29	+1.3
1,082,394	-		RR42_RS04875	0.29	+1.0
1,082,420	+		RR42_RS04875	0.34	-1.0
1,082,420	+		RR42_RS04875	0.34	+1.0
1,082,421	-		RR42_RS04875	0.35	-1.0
1,082,421	-		RR42_RS04875	0.35	-0.3
1,082,627	-		RR42_RS04875	0.75	-2.9
1,082,627	-		RR42_RS04875	0.75	+0.9
1,082,747	+				-1.4