Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04615

Experiment: Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source 2-Deoxyadenosine 5-monophosphate 5 mM
1,027,686	+		RR42_RS04605	0.76	-0.8
1,027,689	+		RR42_RS04605	0.76	+0.5
1,027,689	+		RR42_RS04605	0.76	-2.1
1,027,690	-		RR42_RS04605	0.76	+1.7
1,027,816	+				+1.1
1,027,816	+				-0.1
1,027,816	+				-0.0
1,027,816	+				+0.5
1,027,816	+				+0.3
1,027,816	+				+0.7
1,027,816	+				+0.1
1,027,816	+				+1.2
1,027,817	-				+0.7
1,027,817	-				+0.4
1,027,817	-				-0.1
1,027,817	-				+1.9
1,027,822	-				+1.1
1,027,893	+				+1.5
1,027,893	+				-0.2
1,027,893	+				-0.9
1,027,894	-				+0.7
1,027,894	-				+1.1
1,027,894	-				+1.1
1,027,894	-				-0.6
1,027,894	-				+0.7
1,028,008	+				+1.4
1,028,008	+				+1.1
1,028,009	-				+0.9
1,028,009	-				+0.2
1,028,009	-				+0.2
1,028,009	-				-0.4
1,028,172	+		RR42_RS04610	0.21	+2.4
1,028,172	+		RR42_RS04610	0.21	-0.0
1,028,312	-		RR42_RS04610	0.55	-0.9
1,028,385	+		RR42_RS04610	0.73	-0.8
1,028,385	+		RR42_RS04610	0.73	-0.0
1,028,386	-		RR42_RS04610	0.74	+0.7
1,028,386	-		RR42_RS04610	0.74	+0.5
1,028,386	-		RR42_RS04610	0.74	+0.1
1,028,386	-		RR42_RS04610	0.74	-0.3
1,028,506	+				+0.5
1,028,507	-				+0.7
1,028,537	-				-0.2
1,028,550	-				-0.4
1,028,577	+				+0.2
1,028,577	+				-1.3
1,028,578	-				-0.2
1,028,578	-				+0.6
1,028,578	-				+1.1
1,028,632	+				-3.2
1,028,927	+		RR42_RS04615	0.24	-2.0
1,028,927	+		RR42_RS04615	0.24	+0.0
1,029,044	+		RR42_RS04615	0.34	-1.7
1,029,044	+		RR42_RS04615	0.34	-0.2
1,029,045	-		RR42_RS04615	0.35	-0.5
1,029,045	-		RR42_RS04615	0.35	-0.7
1,029,273	+		RR42_RS04615	0.55	+1.3
1,029,273	+		RR42_RS04615	0.55	+0.5
1,029,274	-		RR42_RS04615	0.55	+1.4
1,029,274	-		RR42_RS04615	0.55	-0.2
1,029,299	+		RR42_RS04615	0.57	-2.5
1,029,299	+		RR42_RS04615	0.57	-0.2
1,029,299	+		RR42_RS04615	0.57	+1.5
1,029,306	-		RR42_RS04615	0.58	+0.9
1,029,371	-		RR42_RS04615	0.63	+0.6
1,029,473	-		RR42_RS04615	0.72	-0.4
1,029,548	+		RR42_RS04615	0.79	+0.6
1,029,548	+		RR42_RS04615	0.79	+0.1
1,029,548	+		RR42_RS04615	0.79	+2.6
1,029,548	+		RR42_RS04615	0.79	+2.3
1,029,549	-		RR42_RS04615	0.79	-1.5
1,029,549	-		RR42_RS04615	0.79	-2.0
1,029,549	-		RR42_RS04615	0.79	+0.1
1,029,550	+		RR42_RS04615	0.79	+0.2
1,029,550	+		RR42_RS04615	0.79	+1.3
1,029,550	+		RR42_RS04615	0.79	+0.3
1,029,550	+		RR42_RS04615	0.79	-0.3
1,029,550	+		RR42_RS04615	0.79	+0.7
1,029,551	-		RR42_RS04615	0.79	+0.9
1,029,551	-		RR42_RS04615	0.79	+0.0
1,029,551	-		RR42_RS04615	0.79	+0.6
1,029,551	-		RR42_RS04615	0.79	+1.2
1,029,551	-		RR42_RS04615	0.79	-0.9
1,029,823	+				-1.6