Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23110

Experiment: L-Isoleucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (N)
2,394,116	-		PGA1_c23100	0.23	-0.7
2,394,137	-		PGA1_c23100	0.26	-0.1
2,394,179	-		PGA1_c23100	0.30	-0.2
2,394,183	-		PGA1_c23100	0.30	+0.1
2,394,214	+		PGA1_c23100	0.34	+0.2
2,394,217	+		PGA1_c23100	0.34	+0.5
2,394,280	-		PGA1_c23100	0.41	-0.5
2,394,337	+		PGA1_c23100	0.46	-0.6
2,394,344	-		PGA1_c23100	0.47	-0.8
2,394,437	+		PGA1_c23100	0.57	-0.2
2,394,445	-		PGA1_c23100	0.58	-0.6
2,394,445	-		PGA1_c23100	0.58	-2.4
2,394,445	-		PGA1_c23100	0.58	-0.1
2,394,445	-		PGA1_c23100	0.58	-1.3
2,394,445	-		PGA1_c23100	0.58	-0.2
2,394,445	-		PGA1_c23100	0.58	+0.4
2,394,445	-		PGA1_c23100	0.58	+0.1
2,394,462	-		PGA1_c23100	0.60	-0.7
2,394,462	-		PGA1_c23100	0.60	+1.3
2,394,462	-		PGA1_c23100	0.60	+0.2
2,394,552	+		PGA1_c23100	0.69	-0.3
2,394,552	+		PGA1_c23100	0.69	-0.4
2,394,552	+		PGA1_c23100	0.69	+0.4
2,394,560	-		PGA1_c23100	0.70	+0.5
2,394,667	+		PGA1_c23100	0.81	-0.9
2,394,692	-		PGA1_c23100	0.84	-1.2
2,394,699	+		PGA1_c23100	0.84	-1.0
2,394,750	-		PGA1_c23100	0.90	+0.3
2,394,750	-		PGA1_c23100	0.90	+0.5
2,394,752	+		PGA1_c23100	0.90	-0.3
2,394,752	+		PGA1_c23100	0.90	+0.1
2,394,783	+				+0.8
2,394,878	+				+0.4
2,394,892	+				-0.3
2,394,916	-				+1.2
2,394,920	+				-0.3
2,394,925	+				-0.2
2,394,926	+				+1.0
2,394,926	+				+0.6
2,394,928	-				-0.4
2,394,931	+				-1.0
2,394,933	-				-0.5
2,394,936	+				+0.6
2,395,053	+				-0.1
2,395,053	+				-0.8
2,395,061	-				-0.8
2,395,113	+				+0.4
2,395,115	+				-0.7
2,395,115	+				-0.5
2,395,119	+				+0.7
2,395,123	-				-0.8
2,395,162	-				+0.1
2,395,163	+				-0.3
2,395,163	+				-0.8
2,395,168	+				+0.1
2,395,171	-				+0.6
2,395,173	+				-0.9
2,395,174	+				+0.5
2,395,176	-				-0.1
2,395,176	-				-0.2
2,395,182	-				+0.6
2,395,182	-				+1.2
2,395,189	+				+0.3
2,395,196	-				+1.4
2,395,197	-				+0.1
2,395,197	-				-0.5
2,395,197	-				-0.2
2,395,198	+				+0.2
2,395,220	+				-1.4
2,395,236	+				-0.1
2,395,265	-		PGA1_c23110	0.11	+0.1
2,395,290	+		PGA1_c23110	0.12	-1.2
2,395,290	+		PGA1_c23110	0.12	-1.9
2,395,290	+		PGA1_c23110	0.12	-1.5
2,395,339	-		PGA1_c23110	0.15	-0.9
2,395,339	-		PGA1_c23110	0.15	+0.6
2,395,382	+		PGA1_c23110	0.17	+0.4
2,395,390	-		PGA1_c23110	0.18	+0.5
2,395,390	-		PGA1_c23110	0.18	-1.3
2,395,411	+		PGA1_c23110	0.19	-0.1
2,395,430	-		PGA1_c23110	0.20	-0.0
2,395,430	-		PGA1_c23110	0.20	+0.7
2,395,445	-		PGA1_c23110	0.21	-0.6
2,395,493	+		PGA1_c23110	0.23	-0.1
2,395,501	-		PGA1_c23110	0.24	-0.3
2,395,501	-		PGA1_c23110	0.24	-1.3
2,395,501	-		PGA1_c23110	0.24	-0.7
2,395,501	-		PGA1_c23110	0.24	-1.0
2,395,516	+		PGA1_c23110	0.24	+0.6
2,395,521	-		PGA1_c23110	0.25	-0.3
2,395,561	+		PGA1_c23110	0.27	+0.2
2,395,598	+		PGA1_c23110	0.29	+0.4
2,395,612	-		PGA1_c23110	0.30	-0.2
2,395,642	-		PGA1_c23110	0.31	-0.8
2,395,647	-		PGA1_c23110	0.32	-0.2
2,395,654	+		PGA1_c23110	0.32	-1.9
2,395,679	+		PGA1_c23110	0.33	-0.7
2,395,684	+		PGA1_c23110	0.34	-1.0
2,395,684	+		PGA1_c23110	0.34	-0.1
2,395,692	-		PGA1_c23110	0.34	-2.1
2,395,692	-		PGA1_c23110	0.34	-1.0
2,395,694	+		PGA1_c23110	0.34	+1.4
2,395,694	+		PGA1_c23110	0.34	+0.4
2,395,704	-		PGA1_c23110	0.35	-2.4
2,395,739	-		PGA1_c23110	0.37	+0.5
2,395,749	-		PGA1_c23110	0.37	+1.4
2,395,794	-		PGA1_c23110	0.40	-1.0
2,395,850	+		PGA1_c23110	0.43	+0.1
2,395,850	+		PGA1_c23110	0.43	+0.7
2,395,850	+		PGA1_c23110	0.43	+2.1
2,395,855	+		PGA1_c23110	0.43	-0.8
2,395,860	+		PGA1_c23110	0.43	-0.0
2,395,863	-		PGA1_c23110	0.43	-0.6
2,395,863	-		PGA1_c23110	0.43	-0.0
2,395,863	-		PGA1_c23110	0.43	-0.5
2,395,868	-		PGA1_c23110	0.44	-0.3
2,395,868	-		PGA1_c23110	0.44	-0.4
2,395,868	-		PGA1_c23110	0.44	+0.1
2,395,907	+		PGA1_c23110	0.46	+1.5
2,395,932	-		PGA1_c23110	0.47	-0.2
2,395,981	+		PGA1_c23110	0.50	-1.8
2,395,981	+		PGA1_c23110	0.50	-0.8
2,395,981	+		PGA1_c23110	0.50	+0.1
2,395,981	+		PGA1_c23110	0.50	-0.2
2,395,981	+		PGA1_c23110	0.50	-0.4
2,395,981	+		PGA1_c23110	0.50	+0.2
2,395,981	+		PGA1_c23110	0.50	+0.6
2,395,989	-		PGA1_c23110	0.50	+0.5
2,395,989	-		PGA1_c23110	0.50	+0.6
2,395,989	-		PGA1_c23110	0.50	-1.3
2,396,060	-		PGA1_c23110	0.54	-0.1
2,396,107	-		PGA1_c23110	0.57	+0.2
2,396,135	+		PGA1_c23110	0.58	+0.7
2,396,159	+		PGA1_c23110	0.59	+0.3
2,396,159	+		PGA1_c23110	0.59	-0.3
2,396,174	+		PGA1_c23110	0.60	+0.2
2,396,177	-		PGA1_c23110	0.60	+0.2
2,396,182	-		PGA1_c23110	0.61	-0.4
2,396,182	-		PGA1_c23110	0.61	-0.5
2,396,182	-		PGA1_c23110	0.61	-1.2
2,396,289	+		PGA1_c23110	0.66	-0.2
2,396,294	+		PGA1_c23110	0.67	+0.0
2,396,297	-		PGA1_c23110	0.67	+1.1
2,396,342	+		PGA1_c23110	0.69	-0.0
2,396,350	-		PGA1_c23110	0.70	+0.9
2,396,361	+		PGA1_c23110	0.70	+0.4
2,396,367	-		PGA1_c23110	0.71	-1.8
2,396,382	-		PGA1_c23110	0.71	-0.1
2,396,408	+		PGA1_c23110	0.73	+0.2
2,396,415	+		PGA1_c23110	0.73	-0.5
2,396,415	+		PGA1_c23110	0.73	+0.4
2,396,416	-		PGA1_c23110	0.73	-0.4
2,396,416	-		PGA1_c23110	0.73	-1.0
2,396,423	-		PGA1_c23110	0.74	+1.1
2,396,423	-		PGA1_c23110	0.74	+0.9
2,396,423	-		PGA1_c23110	0.74	+0.6
2,396,460	-		PGA1_c23110	0.76	+0.2
2,396,500	+		PGA1_c23110	0.78	-1.4
2,396,571	-		PGA1_c23110	0.82	-1.8
2,396,610	+		PGA1_c23110	0.84	+0.4
2,396,662	+		PGA1_c23110	0.87	+1.0
2,396,672	-		PGA1_c23110	0.87	+0.2
2,396,707	+		PGA1_c23110	0.89	-0.2
2,396,728	+				-0.1
2,396,906	-				+0.9
2,396,918	+				-1.0
2,396,924	+				-1.1
2,396,949	-				-0.5
2,396,982	+				+0.5
2,396,987	+				-0.6
2,396,987	+				+0.5
2,396,987	+				+0.2
2,396,987	+				+1.0
2,396,987	+				-0.2
2,396,987	+				-0.6
2,396,987	+				-0.4
2,396,987	+				+1.7
2,396,987	+				+0.8
2,396,995	-				-0.0
2,396,995	-				+0.6
2,396,995	-				+0.7
2,396,995	-				-0.6
2,396,995	-				+0.3
2,397,014	+		PGA1_c23120	0.11	+1.0
2,397,021	+		PGA1_c23120	0.12	+0.1
2,397,035	-		PGA1_c23120	0.13	-0.1
2,397,059	+		PGA1_c23120	0.16	+0.2
2,397,079	+		PGA1_c23120	0.19	-0.0
2,397,130	-		PGA1_c23120	0.25	+0.6
2,397,140	+		PGA1_c23120	0.26	-0.2
2,397,167	+		PGA1_c23120	0.30	-0.9
2,397,167	+		PGA1_c23120	0.30	-2.2
2,397,175	-		PGA1_c23120	0.31	-0.0
2,397,175	-		PGA1_c23120	0.31	+0.3
2,397,197	-		PGA1_c23120	0.33	-0.0
2,397,197	-		PGA1_c23120	0.33	+0.3
2,397,197	-		PGA1_c23120	0.33	+1.5
2,397,199	+		PGA1_c23120	0.34	-0.2
2,397,199	+		PGA1_c23120	0.34	+0.1
2,397,207	-		PGA1_c23120	0.35	-0.6
2,397,207	-		PGA1_c23120	0.35	-0.3
2,397,207	-		PGA1_c23120	0.35	+0.0
2,397,207	-		PGA1_c23120	0.35	+0.4
2,397,212	-		PGA1_c23120	0.35	+0.8
2,397,217	-		PGA1_c23120	0.36	+0.2
2,397,255	+		PGA1_c23120	0.40	-0.9
2,397,308	-		PGA1_c23120	0.47	+1.7
2,397,372	+		PGA1_c23120	0.55	-0.1
2,397,412	+		PGA1_c23120	0.60	+0.3
2,397,435	+		PGA1_c23120	0.63	-1.2
2,397,435	+		PGA1_c23120	0.63	+0.3
2,397,435	+		PGA1_c23120	0.63	-0.4
2,397,435	+		PGA1_c23120	0.63	+0.1
2,397,443	-		PGA1_c23120	0.64	-0.1
2,397,443	-		PGA1_c23120	0.64	+0.3
2,397,443	-		PGA1_c23120	0.64	-0.6
2,397,467	-		PGA1_c23120	0.67	-1.3
2,397,508	-		PGA1_c23120	0.72	-0.7
2,397,512	+		PGA1_c23120	0.72	-0.4
2,397,515	-		PGA1_c23120	0.73	+0.4
2,397,569	-		PGA1_c23120	0.79	-0.5
2,397,578	+		PGA1_c23120	0.80	-1.2
2,397,578	+		PGA1_c23120	0.80	+0.9
2,397,578	+		PGA1_c23120	0.80	-1.1
2,397,578	+		PGA1_c23120	0.80	+0.4
2,397,586	-		PGA1_c23120	0.81	-0.0
2,397,586	-		PGA1_c23120	0.81	+1.0
2,397,641	-		PGA1_c23120	0.88	+1.3
2,397,671	+				-0.4
2,397,724	+				+0.1
2,397,729	+				-2.3
2,397,732	-				-0.5
2,397,784	-				+2.0
2,397,809	+				-0.5
2,397,817	-				+0.4
2,397,837	+				-0.2
2,397,846	-				-1.5
2,397,846	-				+0.7
2,397,846	-				-0.7
2,397,846	-				-0.2
2,397,864	+				+0.3