Experiment: MoLS4 with Putrescine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0568 and flrA are separated by 278 nucleotides flrA and DVU0570 overlap by 4 nucleotides DVU0570 and ald are separated by 205 nucleotides
DVU0568: DVU0568 - rhodanese-like domain protein (TIGR), at 633,096 to 634,136
DVU0568
DVU0569: flrA - sigma-54 dependent transcriptional regulator (TIGR), at 634,415 to 635,995
flrA
DVU0570: DVU0570 - hypothetical protein (TIGR), at 635,992 to 636,168
DVU0570
DVU0571: ald - alanine dehydrogenase (TIGR), at 636,374 to 637,486
ald
Position (kb) 634
635
636 Strain fitness (log2 ratio) -2
-1
0
1 at 633.462 kb on - strand, within DVU0568 at 633.482 kb on - strand, within DVU0568 at 633.510 kb on - strand, within DVU0568 at 633.510 kb on - strand, within DVU0568 at 633.530 kb on + strand, within DVU0568 at 633.535 kb on + strand, within DVU0568 at 633.538 kb on - strand, within DVU0568 at 633.543 kb on - strand, within DVU0568 at 633.548 kb on - strand, within DVU0568 at 633.584 kb on + strand, within DVU0568 at 633.697 kb on + strand, within DVU0568 at 633.762 kb on - strand, within DVU0568 at 633.772 kb on + strand, within DVU0568 at 633.780 kb on - strand, within DVU0568 at 633.790 kb on + strand, within DVU0568 at 633.798 kb on - strand, within DVU0568 at 633.858 kb on - strand, within DVU0568 at 633.863 kb on - strand, within DVU0568 at 633.863 kb on - strand, within DVU0568 at 633.907 kb on + strand, within DVU0568 at 633.907 kb on + strand, within DVU0568 at 633.915 kb on - strand, within DVU0568 at 633.919 kb on + strand, within DVU0568 at 633.935 kb on + strand, within DVU0568 at 633.994 kb on - strand, within DVU0568 at 633.996 kb on - strand, within DVU0568 at 634.080 kb on + strand at 634.110 kb on + strand at 634.149 kb on + strand at 634.177 kb on + strand at 634.184 kb on + strand at 634.211 kb on - strand at 634.211 kb on - strand at 634.305 kb on - strand at 634.425 kb on + strand at 634.452 kb on - strand at 634.563 kb on + strand at 634.563 kb on - strand at 634.600 kb on + strand, within flrA at 634.615 kb on - strand, within flrA at 634.637 kb on + strand, within flrA at 634.637 kb on + strand, within flrA at 634.645 kb on - strand, within flrA at 634.645 kb on - strand, within flrA at 634.645 kb on - strand, within flrA at 634.645 kb on - strand, within flrA at 634.671 kb on + strand, within flrA at 634.763 kb on + strand, within flrA at 634.771 kb on - strand, within flrA at 634.771 kb on - strand, within flrA at 634.793 kb on - strand, within flrA at 634.813 kb on + strand, within flrA at 634.832 kb on - strand, within flrA at 634.946 kb on - strand, within flrA at 635.049 kb on + strand, within flrA at 635.053 kb on + strand, within flrA at 635.185 kb on + strand, within flrA at 635.231 kb on + strand, within flrA at 635.440 kb on - strand, within flrA at 635.479 kb on + strand, within flrA at 635.518 kb on - strand, within flrA at 635.549 kb on - strand, within flrA at 635.553 kb on - strand, within flrA at 635.571 kb on + strand, within flrA at 635.631 kb on - strand, within flrA at 635.702 kb on + strand, within flrA at 635.775 kb on + strand, within flrA at 635.783 kb on - strand, within flrA at 635.785 kb on + strand, within flrA at 635.817 kb on + strand, within flrA at 635.836 kb on - strand, within flrA at 635.841 kb on - strand at 636.258 kb on + strand at 636.266 kb on - strand at 636.294 kb on + strand at 636.307 kb on + strand at 636.438 kb on + strand at 636.446 kb on - strand at 636.470 kb on + strand at 636.475 kb on + strand at 636.483 kb on - strand at 636.494 kb on - strand, within ald at 636.692 kb on + strand, within ald at 636.692 kb on + strand, within ald at 636.692 kb on + strand, within ald at 636.692 kb on + strand, within ald at 636.731 kb on + strand, within ald at 636.764 kb on + strand, within ald at 636.805 kb on - strand, within ald at 636.867 kb on + strand, within ald at 636.952 kb on + strand, within ald
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Putrescine (N) remove 633,462 - DVU0568 0.35 +0.1 633,482 - DVU0568 0.37 -0.1 633,510 - DVU0568 0.40 -0.7 633,510 - DVU0568 0.40 +0.7 633,530 + DVU0568 0.42 -1.3 633,535 + DVU0568 0.42 -0.1 633,538 - DVU0568 0.42 +0.2 633,543 - DVU0568 0.43 -0.0 633,548 - DVU0568 0.43 +0.2 633,584 + DVU0568 0.47 -0.8 633,697 + DVU0568 0.58 -0.0 633,762 - DVU0568 0.64 -0.3 633,772 + DVU0568 0.65 +0.1 633,780 - DVU0568 0.66 -0.1 633,790 + DVU0568 0.67 +0.7 633,798 - DVU0568 0.67 -2.1 633,858 - DVU0568 0.73 +0.7 633,863 - DVU0568 0.74 +0.1 633,863 - DVU0568 0.74 +1.1 633,907 + DVU0568 0.78 -0.0 633,907 + DVU0568 0.78 +0.0 633,915 - DVU0568 0.79 -0.1 633,919 + DVU0568 0.79 +0.4 633,935 + DVU0568 0.81 +0.1 633,994 - DVU0568 0.86 +1.3 633,996 - DVU0568 0.86 +0.2 634,080 + +0.4 634,110 + -1.6 634,149 + +0.1 634,177 + +0.6 634,184 + +0.3 634,211 - +0.3 634,211 - -0.1 634,305 - +0.3 634,425 + +0.2 634,452 - +1.0 634,563 + +0.3 634,563 - +0.7 634,600 + flrA DVU0569 0.12 +0.9 634,615 - flrA DVU0569 0.13 +0.0 634,637 + flrA DVU0569 0.14 +1.0 634,637 + flrA DVU0569 0.14 +1.7 634,645 - flrA DVU0569 0.15 +1.2 634,645 - flrA DVU0569 0.15 +0.9 634,645 - flrA DVU0569 0.15 +0.9 634,645 - flrA DVU0569 0.15 +0.8 634,671 + flrA DVU0569 0.16 +1.3 634,763 + flrA DVU0569 0.22 +0.9 634,771 - flrA DVU0569 0.23 +1.0 634,771 - flrA DVU0569 0.23 +1.0 634,793 - flrA DVU0569 0.24 +1.1 634,813 + flrA DVU0569 0.25 +1.2 634,832 - flrA DVU0569 0.26 +0.7 634,946 - flrA DVU0569 0.34 +1.0 635,049 + flrA DVU0569 0.40 +0.7 635,053 + flrA DVU0569 0.40 +1.0 635,185 + flrA DVU0569 0.49 +0.2 635,231 + flrA DVU0569 0.52 +0.5 635,440 - flrA DVU0569 0.65 +1.3 635,479 + flrA DVU0569 0.67 +1.1 635,518 - flrA DVU0569 0.70 +1.1 635,549 - flrA DVU0569 0.72 +0.4 635,553 - flrA DVU0569 0.72 +1.2 635,571 + flrA DVU0569 0.73 +0.6 635,631 - flrA DVU0569 0.77 +0.7 635,702 + flrA DVU0569 0.81 +0.6 635,775 + flrA DVU0569 0.86 +1.1 635,783 - flrA DVU0569 0.87 +1.0 635,785 + flrA DVU0569 0.87 +0.8 635,817 + flrA DVU0569 0.89 +1.2 635,836 - flrA DVU0569 0.90 +1.1 635,841 - +1.2 636,258 + -0.1 636,266 - +0.0 636,294 + +0.0 636,307 + -0.1 636,438 + +0.4 636,446 - -2.1 636,470 + -0.0 636,475 + -1.1 636,483 - +0.1 636,494 - ald DVU0571 0.11 -0.5 636,692 + ald DVU0571 0.29 +0.0 636,692 + ald DVU0571 0.29 -0.3 636,692 + ald DVU0571 0.29 -0.7 636,692 + ald DVU0571 0.29 -0.2 636,731 + ald DVU0571 0.32 -0.4 636,764 + ald DVU0571 0.35 -2.1 636,805 - ald DVU0571 0.39 -0.3 636,867 + ald DVU0571 0.44 -0.1 636,952 + ald DVU0571 0.52 -0.1
Or see this region's nucleotide sequence