Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23250

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
2,412,066	-		PGA1_c23240	0.18	-1.0
2,412,068	+		PGA1_c23240	0.18	-1.5
2,412,068	+		PGA1_c23240	0.18	-0.4
2,412,154	+		PGA1_c23240	0.26	-0.2
2,412,154	+		PGA1_c23240	0.26	+0.3
2,412,174	+		PGA1_c23240	0.28	-0.4
2,412,182	-		PGA1_c23240	0.29	+0.1
2,412,189	+		PGA1_c23240	0.29	-0.7
2,412,189	+		PGA1_c23240	0.29	-0.8
2,412,190	-		PGA1_c23240	0.30	+0.7
2,412,197	-		PGA1_c23240	0.30	+0.7
2,412,197	-		PGA1_c23240	0.30	+0.3
2,412,209	+		PGA1_c23240	0.31	-0.8
2,412,209	+		PGA1_c23240	0.31	+0.6
2,412,263	-		PGA1_c23240	0.36	+0.3
2,412,273	+		PGA1_c23240	0.37	-0.2
2,412,278	+		PGA1_c23240	0.38	+0.0
2,412,291	-		PGA1_c23240	0.39	-0.7
2,412,305	+		PGA1_c23240	0.40	+0.6
2,412,305	+		PGA1_c23240	0.40	+0.6
2,412,313	-		PGA1_c23240	0.41	-0.3
2,412,324	-		PGA1_c23240	0.42	-0.6
2,412,334	+		PGA1_c23240	0.43	+0.3
2,412,334	+		PGA1_c23240	0.43	-0.0
2,412,334	+		PGA1_c23240	0.43	+0.3
2,412,334	+		PGA1_c23240	0.43	+0.6
2,412,334	+		PGA1_c23240	0.43	+0.0
2,412,334	+		PGA1_c23240	0.43	+0.8
2,412,334	+		PGA1_c23240	0.43	-0.2
2,412,334	+		PGA1_c23240	0.43	+0.1
2,412,334	+		PGA1_c23240	0.43	-0.4
2,412,334	+		PGA1_c23240	0.43	-0.1
2,412,334	+		PGA1_c23240	0.43	-0.1
2,412,334	+		PGA1_c23240	0.43	-1.0
2,412,334	+		PGA1_c23240	0.43	+0.0
2,412,342	-		PGA1_c23240	0.44	-0.4
2,412,342	-		PGA1_c23240	0.44	-0.8
2,412,342	-		PGA1_c23240	0.44	-0.1
2,412,342	-		PGA1_c23240	0.44	-0.2
2,412,342	-		PGA1_c23240	0.44	-0.0
2,412,342	-		PGA1_c23240	0.44	+0.6
2,412,342	-		PGA1_c23240	0.44	-0.3
2,412,376	-		PGA1_c23240	0.47	+0.2
2,412,415	-		PGA1_c23240	0.51	+0.2
2,412,417	+		PGA1_c23240	0.51	-1.0
2,412,425	-		PGA1_c23240	0.52	-0.4
2,412,447	+		PGA1_c23240	0.54	+0.3
2,412,501	+		PGA1_c23240	0.59	-0.7
2,412,501	+		PGA1_c23240	0.59	-0.1
2,412,501	-		PGA1_c23240	0.59	+0.2
2,412,509	-		PGA1_c23240	0.60	-0.2
2,412,509	-		PGA1_c23240	0.60	+0.8
2,412,555	+		PGA1_c23240	0.64	+0.8
2,412,555	+		PGA1_c23240	0.64	+0.6
2,412,555	+		PGA1_c23240	0.64	+0.4
2,412,555	+		PGA1_c23240	0.64	-0.3
2,412,563	-		PGA1_c23240	0.65	+0.7
2,412,589	+		PGA1_c23240	0.68	-0.8
2,412,622	+		PGA1_c23240	0.71	+0.6
2,412,629	-		PGA1_c23240	0.71	-0.4
2,412,634	+		PGA1_c23240	0.72	-0.5
2,412,636	-		PGA1_c23240	0.72	+0.2
2,412,647	+		PGA1_c23240	0.73	-1.1
2,412,655	-		PGA1_c23240	0.74	-1.5
2,412,728	+		PGA1_c23240	0.81	-0.3
2,412,728	+		PGA1_c23240	0.81	+0.9
2,412,728	+		PGA1_c23240	0.81	+0.8
2,412,729	-		PGA1_c23240	0.81	+1.5
2,412,729	-		PGA1_c23240	0.81	+0.3
2,412,729	-		PGA1_c23240	0.81	+0.3
2,412,731	-		PGA1_c23240	0.81	+0.8
2,412,731	-		PGA1_c23240	0.81	+0.1
2,412,731	-		PGA1_c23240	0.81	-0.1
2,412,744	+		PGA1_c23240	0.82	-0.6
2,412,744	+		PGA1_c23240	0.82	-0.6
2,412,749	+		PGA1_c23240	0.83	-1.4
2,412,797	+		PGA1_c23240	0.87	+0.8
2,412,804	+		PGA1_c23240	0.88	+0.2
2,412,804	+		PGA1_c23240	0.88	+0.7
2,412,805	-		PGA1_c23240	0.88	+0.3
2,412,857	-				+0.3
2,412,861	+				+0.7
2,412,861	+				+0.0
2,412,866	-				-0.3
2,412,946	+				-0.4
2,413,033	+				-0.8
2,413,033	+				-0.6
2,413,033	+				+0.3
2,413,033	+				-0.5
2,413,033	+				+1.2
2,413,041	-				-0.1
2,413,046	-				-1.4
2,413,046	-				+0.3
2,413,048	+				-0.1
2,413,062	-				-0.3
2,413,065	+				+1.1
2,413,065	+				-0.0
2,413,073	-				+0.6
2,413,073	-				+0.3
2,413,073	-				-0.8
2,413,092	-				+0.0
2,413,097	+				-0.8
2,413,098	+				+1.2
2,413,105	+				-0.3
2,413,106	-				-0.5
2,413,106	-				-0.9
2,413,108	-				+0.3
2,413,114	-				+0.8
2,413,266	+		PGA1_c23250	0.26	+1.1
2,413,266	+		PGA1_c23250	0.26	+0.6
2,413,274	-		PGA1_c23250	0.27	+0.6
2,413,274	-		PGA1_c23250	0.27	+1.8
2,413,302	+		PGA1_c23250	0.30	+0.5
2,413,312	+		PGA1_c23250	0.31	+0.4
2,413,312	+		PGA1_c23250	0.31	+1.0
2,413,312	+		PGA1_c23250	0.31	+1.2
2,413,320	-		PGA1_c23250	0.32	-0.0
2,413,335	-		PGA1_c23250	0.34	+0.7
2,413,389	+		PGA1_c23250	0.41	-0.8
2,413,400	+		PGA1_c23250	0.42	+0.6
2,413,413	+		PGA1_c23250	0.43	-1.7
2,413,421	-		PGA1_c23250	0.44	+0.5
2,413,427	+		PGA1_c23250	0.45	+1.1
2,413,490	+		PGA1_c23250	0.53	-0.5
2,413,498	-		PGA1_c23250	0.54	+1.0
2,413,498	-		PGA1_c23250	0.54	+0.0
2,413,557	+		PGA1_c23250	0.61	+0.5
2,413,565	-		PGA1_c23250	0.62	+0.1
2,413,619	-		PGA1_c23250	0.68	+0.8
2,413,623	+		PGA1_c23250	0.69	+1.2
2,413,623	+		PGA1_c23250	0.69	+0.1
2,413,623	+		PGA1_c23250	0.69	-1.2
2,413,623	+		PGA1_c23250	0.69	-1.4
2,413,623	+		PGA1_c23250	0.69	+1.8
2,413,623	+		PGA1_c23250	0.69	-0.9
2,413,623	+		PGA1_c23250	0.69	+1.3
2,413,623	+		PGA1_c23250	0.69	+0.2
2,413,623	+		PGA1_c23250	0.69	-0.3
2,413,623	+		PGA1_c23250	0.69	-0.1
2,413,623	+		PGA1_c23250	0.69	-0.2
2,413,631	-		PGA1_c23250	0.70	-0.3
2,413,631	-		PGA1_c23250	0.70	-0.4
2,413,631	-		PGA1_c23250	0.70	-0.2
2,413,631	-		PGA1_c23250	0.70	+1.2
2,413,631	-		PGA1_c23250	0.70	+1.0
2,413,657	+		PGA1_c23250	0.73	-0.2
2,413,710	-		PGA1_c23250	0.79	+0.6
2,413,712	+		PGA1_c23250	0.79	+1.2
2,413,713	-		PGA1_c23250	0.79	+1.4
2,413,714	+		PGA1_c23250	0.79	-0.1
2,413,720	-		PGA1_c23250	0.80	+1.3
2,413,721	-		PGA1_c23250	0.80	+0.8
2,413,731	+		PGA1_c23250	0.81	-0.2
2,413,822	-				+0.8
2,413,832	+				-0.1
2,413,835	-				-0.7
2,413,864	+				+0.1
2,413,896	+				-1.0
2,413,903	+				+0.1
2,413,904	-				+0.9
2,413,911	-				+0.8
2,413,911	-				-0.8
2,413,911	-				+1.4
2,413,915	+				+0.6
2,413,951	-				+0.3
2,413,951	-				-1.5
2,413,958	+				+0.8
2,413,958	+				-0.8
2,413,966	-				-0.8
2,413,966	-				+0.8
2,414,044	+				-0.9
2,414,066	+				-0.0
2,414,066	+				+0.2
2,414,081	+				+0.1
2,414,105	+				+1.7
2,414,130	-				+0.3
2,414,137	+				-0.7
2,414,145	-				+0.4
2,414,191	+				+0.6
2,414,214	+		PGA1_c23260	0.12	-0.2
2,414,214	+		PGA1_c23260	0.12	-0.3
2,414,217	-		PGA1_c23260	0.12	-0.3
2,414,217	-		PGA1_c23260	0.12	-0.2
2,414,272	-		PGA1_c23260	0.18	+0.5
2,414,284	+		PGA1_c23260	0.19	-0.4
2,414,303	-		PGA1_c23260	0.21	+0.5
2,414,317	+		PGA1_c23260	0.23	+0.5
2,414,317	+		PGA1_c23260	0.23	+0.5
2,414,317	+		PGA1_c23260	0.23	+0.3
2,414,325	-		PGA1_c23260	0.24	+0.6
2,414,328	-		PGA1_c23260	0.24	-0.0
2,414,328	-		PGA1_c23260	0.24	-0.3
2,414,330	-		PGA1_c23260	0.24	+1.3
2,414,335	+		PGA1_c23260	0.25	-1.2
2,414,341	+		PGA1_c23260	0.25	+0.1
2,414,394	+		PGA1_c23260	0.31	-0.8
2,414,407	+		PGA1_c23260	0.32	-2.5
2,414,449	+		PGA1_c23260	0.37	-0.2
2,414,458	-		PGA1_c23260	0.38	+0.3
2,414,471	-		PGA1_c23260	0.39	-0.7
2,414,486	-		PGA1_c23260	0.41	-0.6
2,414,504	+		PGA1_c23260	0.42	+0.2
2,414,512	-		PGA1_c23260	0.43	-0.0
2,414,512	-		PGA1_c23260	0.43	-2.6
2,414,512	-		PGA1_c23260	0.43	-0.5
2,414,524	+		PGA1_c23260	0.45	-0.1
2,414,534	+		PGA1_c23260	0.46	-0.7
2,414,542	-		PGA1_c23260	0.46	-1.1
2,414,577	+		PGA1_c23260	0.50	+0.5
2,414,709	+		PGA1_c23260	0.64	+0.7
2,414,724	+		PGA1_c23260	0.66	+1.9
2,414,724	+		PGA1_c23260	0.66	-2.5
2,414,767	+		PGA1_c23260	0.70	-0.7
2,414,772	+		PGA1_c23260	0.71	+0.0
2,414,780	-		PGA1_c23260	0.72	+0.3
2,414,782	+		PGA1_c23260	0.72	-0.1
2,414,782	+		PGA1_c23260	0.72	+0.6
2,414,782	+		PGA1_c23260	0.72	-0.8
2,414,782	+		PGA1_c23260	0.72	-0.3
2,414,782	+		PGA1_c23260	0.72	+0.3
2,414,782	+		PGA1_c23260	0.72	+0.4
2,414,782	+		PGA1_c23260	0.72	-0.8
2,414,782	+		PGA1_c23260	0.72	-1.1
2,414,782	+		PGA1_c23260	0.72	-0.1
2,414,782	+		PGA1_c23260	0.72	-0.4
2,414,782	+		PGA1_c23260	0.72	+0.6
2,414,782	+		PGA1_c23260	0.72	-0.1
2,414,787	+		PGA1_c23260	0.72	-0.5
2,414,790	-		PGA1_c23260	0.73	+0.3
2,414,790	-		PGA1_c23260	0.73	+0.1
2,414,790	-		PGA1_c23260	0.73	-1.7
2,414,790	-		PGA1_c23260	0.73	+1.3
2,414,790	-		PGA1_c23260	0.73	+0.9
2,414,790	-		PGA1_c23260	0.73	-0.7
2,414,790	-		PGA1_c23260	0.73	+0.1
2,414,790	-		PGA1_c23260	0.73	-1.6
2,414,790	-		PGA1_c23260	0.73	+0.7
2,414,790	-		PGA1_c23260	0.73	+1.0
2,414,790	-		PGA1_c23260	0.73	-1.0
2,414,790	-		PGA1_c23260	0.73	+0.6
2,414,790	-		PGA1_c23260	0.73	-0.5
2,414,790	-		PGA1_c23260	0.73	+0.0
2,414,790	-		PGA1_c23260	0.73	-0.2
2,414,790	-		PGA1_c23260	0.73	-0.7
2,414,790	-		PGA1_c23260	0.73	+1.3
2,414,790	-		PGA1_c23260	0.73	-0.1
2,414,790	-		PGA1_c23260	0.73	+0.0
2,414,790	-		PGA1_c23260	0.73	+0.3
2,414,795	-		PGA1_c23260	0.73	-0.8
2,414,813	-		PGA1_c23260	0.75	-0.5
2,414,840	-		PGA1_c23260	0.78	-0.5
2,414,855	-		PGA1_c23260	0.79	+0.0
2,414,862	-		PGA1_c23260	0.80	-0.4