Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12950

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
1,337,784	+				-0.6
1,337,784	+				-0.2
1,337,787	-		PGA1_c12930	0.10	-0.4
1,337,787	-		PGA1_c12930	0.10	-1.5
1,337,787	-		PGA1_c12930	0.10	-1.4
1,337,787	-		PGA1_c12930	0.10	+0.2
1,337,787	-		PGA1_c12930	0.10	-0.2
1,337,792	-		PGA1_c12930	0.15	+0.4
1,337,792	-		PGA1_c12930	0.15	+0.2
1,337,797	-		PGA1_c12930	0.19	+0.3
1,337,873	-				+0.1
1,337,907	+				+0.7
1,337,930	-				-0.1
1,337,941	+				+0.8
1,337,941	+				+0.0
1,337,949	-				+0.0
1,337,949	-				-0.6
1,337,949	-				-1.5
1,337,996	+				-1.1
1,338,023	-				-0.0
1,338,072	-		PGA1_c12940	0.16	-0.0
1,338,102	-		PGA1_c12940	0.20	+0.1
1,338,167	-		PGA1_c12940	0.30	-1.9
1,338,211	-		PGA1_c12940	0.36	-0.0
1,338,211	-		PGA1_c12940	0.36	-0.6
1,338,285	+		PGA1_c12940	0.47	+0.0
1,338,286	-		PGA1_c12940	0.47	-0.6
1,338,286	-		PGA1_c12940	0.47	-0.0
1,338,351	-		PGA1_c12940	0.57	-0.5
1,338,447	-		PGA1_c12940	0.71	-0.9
1,338,493	-		PGA1_c12940	0.77	+0.0
1,338,509	-		PGA1_c12940	0.80	-0.5
1,338,580	+				-0.4
1,338,627	+				+0.0
1,338,640	-				-0.4
1,338,712	+				-0.5
1,338,712	+				+0.4
1,338,712	+				+0.3
1,338,720	-				-1.1
1,338,722	-				+0.2
1,338,756	-				-1.4
1,338,772	+				-0.0
1,338,903	-		PGA1_c12950	0.12	+0.5
1,338,911	-		PGA1_c12950	0.12	+0.2
1,338,913	+		PGA1_c12950	0.12	-0.5
1,338,947	-		PGA1_c12950	0.14	-1.0
1,339,053	+		PGA1_c12950	0.19	+0.0
1,339,125	+		PGA1_c12950	0.22	-0.7
1,339,126	-		PGA1_c12950	0.23	-0.3
1,339,133	-		PGA1_c12950	0.23	-0.2
1,339,159	+		PGA1_c12950	0.24	+0.1
1,339,179	+		PGA1_c12950	0.25	+0.4
1,339,194	+		PGA1_c12950	0.26	+0.6
1,339,194	+		PGA1_c12950	0.26	-0.7
1,339,222	-		PGA1_c12950	0.27	-0.7
1,339,270	-		PGA1_c12950	0.29	-0.8
1,339,271	+		PGA1_c12950	0.29	-0.2
1,339,321	+		PGA1_c12950	0.32	+1.0
1,339,369	+		PGA1_c12950	0.34	-0.6
1,339,414	+		PGA1_c12950	0.36	+0.1
1,339,424	+		PGA1_c12950	0.37	+0.5
1,339,424	+		PGA1_c12950	0.37	-1.0
1,339,424	+		PGA1_c12950	0.37	-0.7
1,339,438	-		PGA1_c12950	0.37	+0.2
1,339,440	-		PGA1_c12950	0.38	-0.1
1,339,458	+		PGA1_c12950	0.38	-0.6
1,339,508	+		PGA1_c12950	0.41	-1.0
1,339,516	-		PGA1_c12950	0.41	-0.9
1,339,516	-		PGA1_c12950	0.41	-0.3
1,339,534	-		PGA1_c12950	0.42	+0.1
1,339,539	-		PGA1_c12950	0.42	-1.1
1,339,545	+		PGA1_c12950	0.43	-0.1
1,339,545	+		PGA1_c12950	0.43	-0.5
1,339,545	+		PGA1_c12950	0.43	+0.0
1,339,545	+		PGA1_c12950	0.43	+0.4
1,339,545	+		PGA1_c12950	0.43	+1.0
1,339,545	+		PGA1_c12950	0.43	-0.2
1,339,545	+		PGA1_c12950	0.43	-0.1
1,339,545	+		PGA1_c12950	0.43	+0.1
1,339,545	+		PGA1_c12950	0.43	-0.2
1,339,545	+		PGA1_c12950	0.43	-1.3
1,339,545	+		PGA1_c12950	0.43	+0.8
1,339,553	-		PGA1_c12950	0.43	-0.2
1,339,553	-		PGA1_c12950	0.43	-1.2
1,339,553	-		PGA1_c12950	0.43	-0.4
1,339,553	-		PGA1_c12950	0.43	-0.7
1,339,553	-		PGA1_c12950	0.43	+0.4
1,339,553	-		PGA1_c12950	0.43	+1.3
1,339,553	-		PGA1_c12950	0.43	+0.1
1,339,568	-		PGA1_c12950	0.44	+0.9
1,339,663	+		PGA1_c12950	0.48	+1.0
1,339,665	+		PGA1_c12950	0.48	-0.0
1,339,671	-		PGA1_c12950	0.49	-0.3
1,339,688	+		PGA1_c12950	0.49	+0.9
1,339,699	+		PGA1_c12950	0.50	-0.5
1,339,794	+		PGA1_c12950	0.55	-0.2
1,339,794	+		PGA1_c12950	0.55	-0.0
1,339,794	+		PGA1_c12950	0.55	+0.4
1,339,802	-		PGA1_c12950	0.55	-0.1
1,339,802	-		PGA1_c12950	0.55	-0.4
1,339,802	-		PGA1_c12950	0.55	-0.2
1,339,804	+		PGA1_c12950	0.55	+0.3
1,339,820	+		PGA1_c12950	0.56	+0.9
1,339,871	-		PGA1_c12950	0.58	-0.0
1,339,886	-		PGA1_c12950	0.59	-0.0
1,339,947	+		PGA1_c12950	0.62	+0.6
1,340,084	-		PGA1_c12950	0.68	-0.7
1,340,127	-		PGA1_c12950	0.70	-0.3
1,340,162	+		PGA1_c12950	0.72	-0.5
1,340,229	-		PGA1_c12950	0.75	-0.4
1,340,229	-		PGA1_c12950	0.75	+0.8
1,340,229	-		PGA1_c12950	0.75	+1.0
1,340,299	+		PGA1_c12950	0.79	-0.9
1,340,307	-		PGA1_c12950	0.79	-0.5
1,340,307	-		PGA1_c12950	0.79	-0.7
1,340,307	-		PGA1_c12950	0.79	+0.3
1,340,307	-		PGA1_c12950	0.79	-0.6
1,340,345	+		PGA1_c12950	0.81	-0.8
1,340,347	+		PGA1_c12950	0.81	-0.1
1,340,413	+		PGA1_c12950	0.84	+0.2
1,340,440	-		PGA1_c12950	0.85	-0.3
1,340,440	-		PGA1_c12950	0.85	-0.0
1,340,450	+		PGA1_c12950	0.86	-0.4
1,340,458	-		PGA1_c12950	0.86	+0.2
1,340,523	+		PGA1_c12950	0.89	+0.5
1,340,555	-				-0.1
1,340,638	-				+0.6
1,340,640	+				-0.0
1,340,643	-				+0.1
1,340,648	-				+0.4
1,340,657	+				+0.2
1,340,657	+				+0.4
1,340,657	+				+0.1
1,340,657	+				-0.4
1,340,657	+				-0.5
1,340,660	-				+0.1
1,340,660	-				-0.1
1,340,660	-				-0.6
1,340,660	-				+0.2
1,340,660	-				+1.5
1,340,665	-				+0.2
1,340,687	+				+1.0
1,340,692	-				+0.2
1,340,745	+				-1.2
1,340,751	+				-0.4
1,340,753	-				-0.5
1,340,753	-				-1.0
1,340,813	-				+0.1
1,340,894	+				+0.1
1,340,897	-				+0.3
1,340,902	-				-0.7
1,340,902	-				-1.4
1,340,902	-				+0.4
1,340,921	-				-0.2
1,340,926	-				+0.8
1,340,945	+				-0.7
1,340,953	-				-0.7
1,340,961	+				+0.0
1,340,961	+				+0.6
1,340,969	-				+1.0
1,340,969	-				+1.1
1,341,010	+				-0.3
1,341,015	+				-0.3
1,341,018	-				+1.4
1,341,034	-				+0.0
1,341,034	-				+0.8
1,341,107	+				-0.7
1,341,115	+				-0.2
1,341,115	+				+0.1
1,341,124	-				+0.0
1,341,144	+				+0.4
1,341,147	-				-0.7
1,341,149	+				+0.5
1,341,157	-				-0.6
1,341,205	+				+0.5
1,341,218	+				+0.0
1,341,228	+				-0.2
1,341,249	-				-0.4
1,341,253	+				-0.3
1,341,266	-				-0.7
1,341,460	+		PGA1_c12960	0.24	-0.8
1,341,470	+		PGA1_c12960	0.25	-0.5
1,341,478	-		PGA1_c12960	0.25	+0.3
1,341,480	+		PGA1_c12960	0.26	-0.1
1,341,480	+		PGA1_c12960	0.26	+0.1
1,341,488	-		PGA1_c12960	0.26	+0.5
1,341,522	-		PGA1_c12960	0.30	-0.0
1,341,535	-		PGA1_c12960	0.31	+0.3
1,341,661	-		PGA1_c12960	0.43	+0.3