Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11690

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
1,210,079	-				+0.5
1,210,104	+				+1.7
1,210,184	-				+0.7
1,210,195	+				-0.1
1,210,198	-				-0.1
1,210,198	-				-0.2
1,210,198	-				-0.4
1,210,198	-				-1.1
1,210,213	+				+0.2
1,210,241	+				+1.3
1,210,251	+				-0.3
1,210,251	+				-0.4
1,210,251	+				-1.2
1,210,251	+				-0.2
1,210,259	-				+1.1
1,210,259	-				-0.2
1,210,259	-				-0.4
1,210,259	-				+0.2
1,210,259	-				+0.8
1,210,259	-				+0.4
1,210,269	-				-0.1
1,210,271	+				-0.2
1,210,295	+				+0.2
1,210,295	+				-0.3
1,210,303	-				+0.0
1,210,307	+				+0.5
1,210,307	+				-0.5
1,210,307	+				+0.6
1,210,307	+				+0.1
1,210,314	-				+0.7
1,210,315	-				-0.6
1,210,316	-				-0.6
1,210,321	-				-0.2
1,210,322	-				-0.3
1,210,337	-				+0.3
1,210,388	+				-0.6
1,210,396	-				-0.0
1,210,398	+				+0.0
1,210,413	+				-1.8
1,210,415	-				+0.5
1,210,421	+				-0.8
1,210,421	+				+0.8
1,210,421	+				+1.3
1,210,516	+				+0.1
1,210,573	+		PGA1_c11680	0.15	+0.0
1,210,573	+		PGA1_c11680	0.15	-0.3
1,210,573	+		PGA1_c11680	0.15	-1.3
1,210,573	+		PGA1_c11680	0.15	+0.3
1,210,581	-		PGA1_c11680	0.16	+0.0
1,210,586	-		PGA1_c11680	0.17	+1.7
1,210,613	+		PGA1_c11680	0.22	+1.3
1,210,615	+		PGA1_c11680	0.22	-0.3
1,210,623	-		PGA1_c11680	0.24	-1.8
1,210,634	+		PGA1_c11680	0.26	-0.0
1,210,642	-		PGA1_c11680	0.27	+0.4
1,210,649	+		PGA1_c11680	0.29	-0.1
1,210,649	+		PGA1_c11680	0.29	+0.2
1,210,649	+		PGA1_c11680	0.29	-0.7
1,210,649	+		PGA1_c11680	0.29	+1.0
1,210,649	+		PGA1_c11680	0.29	+0.9
1,210,649	+		PGA1_c11680	0.29	-0.6
1,210,649	+		PGA1_c11680	0.29	-0.1
1,210,649	+		PGA1_c11680	0.29	+0.6
1,210,649	+		PGA1_c11680	0.29	-0.7
1,210,649	+		PGA1_c11680	0.29	-0.4
1,210,649	+		PGA1_c11680	0.29	-0.0
1,210,649	+		PGA1_c11680	0.29	-0.6
1,210,649	+		PGA1_c11680	0.29	-0.9
1,210,649	+		PGA1_c11680	0.29	+0.2
1,210,649	+		PGA1_c11680	0.29	-1.9
1,210,649	+		PGA1_c11680	0.29	+0.6
1,210,649	+		PGA1_c11680	0.29	-1.2
1,210,649	+		PGA1_c11680	0.29	+0.5
1,210,649	+		PGA1_c11680	0.29	+0.3
1,210,649	+		PGA1_c11680	0.29	-0.3
1,210,649	+		PGA1_c11680	0.29	+0.3
1,210,649	+		PGA1_c11680	0.29	+1.2
1,210,649	+		PGA1_c11680	0.29	+0.1
1,210,649	+		PGA1_c11680	0.29	+1.1
1,210,657	-		PGA1_c11680	0.30	+0.3
1,210,657	-		PGA1_c11680	0.30	+0.2
1,210,657	-		PGA1_c11680	0.30	+0.3
1,210,657	-		PGA1_c11680	0.30	+0.6
1,210,657	-		PGA1_c11680	0.30	+0.1
1,210,657	-		PGA1_c11680	0.30	+0.0
1,210,657	-		PGA1_c11680	0.30	+1.0
1,210,657	-		PGA1_c11680	0.30	+0.0
1,210,657	-		PGA1_c11680	0.30	-0.7
1,210,657	-		PGA1_c11680	0.30	+0.2
1,210,657	-		PGA1_c11680	0.30	+0.2
1,210,755	-		PGA1_c11680	0.48	+0.3
1,210,887	+		PGA1_c11680	0.73	+0.2
1,210,887	+		PGA1_c11680	0.73	-0.1
1,210,900	-		PGA1_c11680	0.75	+1.2
1,210,951	+		PGA1_c11680	0.85	+0.6
1,210,968	-		PGA1_c11680	0.88	-0.0
1,210,996	-				-0.2
1,211,027	+				+0.4
1,211,032	+				+0.9
1,211,065	+				+0.6
1,211,073	-				-0.4
1,211,073	-				-1.1
1,211,073	-				-0.0
1,211,089	+				-0.6
1,211,229	-		PGA1_c11690	0.30	+0.0
1,211,261	+		PGA1_c11690	0.36	-0.4
1,211,269	-		PGA1_c11690	0.37	+0.0
1,211,333	-		PGA1_c11690	0.49	+1.4
1,211,339	+		PGA1_c11690	0.51	+0.3
1,211,347	-		PGA1_c11690	0.52	+0.2
1,211,366	-		PGA1_c11690	0.56	+0.7
1,211,407	+		PGA1_c11690	0.63	-0.1
1,211,407	+		PGA1_c11690	0.63	+0.1
1,211,415	+		PGA1_c11690	0.65	+0.4
1,211,415	+		PGA1_c11690	0.65	-0.1
1,211,417	+		PGA1_c11690	0.65	+1.3
1,211,425	-		PGA1_c11690	0.67	-0.4
1,211,430	-		PGA1_c11690	0.68	+0.1
1,211,430	-		PGA1_c11690	0.68	+0.3
1,211,442	+		PGA1_c11690	0.70	+1.8
1,211,443	-		PGA1_c11690	0.70	+0.5
1,211,533	+		PGA1_c11690	0.87	+1.6
1,211,569	+				+0.3
1,211,569	+				+2.0
1,211,573	-				+0.3
1,211,577	-				+1.1
1,211,577	-				-0.1
1,211,577	-				-0.4
1,211,578	-				+0.0
1,211,589	+				+0.1
1,211,628	-				+1.1
1,211,709	-				-0.5
1,211,799	+				-2.0
1,211,804	+				-1.9
1,211,807	-				-2.3
1,211,812	-				-2.1
1,211,812	-				-2.6
1,211,812	-				-0.9
1,211,829	-		PGA1_c11700	0.10	-1.6
1,211,838	+		PGA1_c11700	0.11	-2.0
1,211,858	+		PGA1_c11700	0.14	-2.5
1,211,866	-		PGA1_c11700	0.15	-2.4
1,211,866	-		PGA1_c11700	0.15	-2.4
1,211,883	-		PGA1_c11700	0.17	-2.2
1,211,959	-		PGA1_c11700	0.25	-2.9
1,211,989	+		PGA1_c11700	0.29	-3.5
1,212,048	-		PGA1_c11700	0.36	-1.8
1,212,131	-		PGA1_c11700	0.45	-1.0
1,212,147	+		PGA1_c11700	0.47	-3.2
1,212,147	+		PGA1_c11700	0.47	-4.6
1,212,147	+		PGA1_c11700	0.47	-3.4
1,212,147	+		PGA1_c11700	0.47	-2.8
1,212,155	-		PGA1_c11700	0.48	-3.0
1,212,155	-		PGA1_c11700	0.48	-1.6
1,212,155	-		PGA1_c11700	0.48	-2.7
1,212,181	-		PGA1_c11700	0.51	-2.3
1,212,273	-		PGA1_c11700	0.61	-3.5
1,212,361	-		PGA1_c11700	0.71	-3.4
1,212,396	+		PGA1_c11700	0.76	-3.4
1,212,396	+		PGA1_c11700	0.76	-2.4
1,212,396	+		PGA1_c11700	0.76	-2.6
1,212,396	+		PGA1_c11700	0.76	-1.8
1,212,396	+		PGA1_c11700	0.76	-2.6
1,212,396	+		PGA1_c11700	0.76	-0.3
1,212,404	-		PGA1_c11700	0.76	-1.0
1,212,404	-		PGA1_c11700	0.76	-3.2
1,212,404	-		PGA1_c11700	0.76	-2.6
1,212,404	-		PGA1_c11700	0.76	-2.1
1,212,404	-		PGA1_c11700	0.76	-1.3
1,212,404	-		PGA1_c11700	0.76	-2.6
1,212,404	-		PGA1_c11700	0.76	-3.0
1,212,404	-		PGA1_c11700	0.76	-2.4
1,212,437	-		PGA1_c11700	0.80	-0.7
1,212,525	+				-3.5
1,212,525	+				-0.9
1,212,525	+				-3.7
1,212,525	+				-4.0
1,212,533	-				-3.4
1,212,533	-				-2.4