Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32160

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
3,372,487	-				+0.4
3,372,500	+				+0.0
3,372,676	-				+0.8
3,372,685	+				+1.9
3,372,693	+				-0.5
3,372,729	+		PGA1_c32150	0.11	-0.5
3,372,756	+		PGA1_c32150	0.15	-0.9
3,372,764	-		PGA1_c32150	0.16	-0.7
3,372,771	-		PGA1_c32150	0.17	+0.8
3,372,783	-		PGA1_c32150	0.19	+0.5
3,372,810	-		PGA1_c32150	0.24	+0.4
3,372,843	+		PGA1_c32150	0.29	-0.8
3,372,868	+		PGA1_c32150	0.33	+0.4
3,372,894	+		PGA1_c32150	0.38	+0.1
3,372,944	+		PGA1_c32150	0.46	-0.2
3,372,944	+		PGA1_c32150	0.46	+1.0
3,372,951	+		PGA1_c32150	0.47	+0.8
3,372,952	-		PGA1_c32150	0.47	-1.2
3,372,952	-		PGA1_c32150	0.47	+0.9
3,372,980	+		PGA1_c32150	0.52	-0.9
3,372,998	-		PGA1_c32150	0.55	+0.8
3,373,042	+		PGA1_c32150	0.62	-0.3
3,373,050	+		PGA1_c32150	0.64	-0.2
3,373,058	-		PGA1_c32150	0.65	-0.7
3,373,099	+		PGA1_c32150	0.72	+0.8
3,373,107	+		PGA1_c32150	0.73	+0.7
3,373,132	-		PGA1_c32150	0.77	-1.0
3,373,147	-		PGA1_c32150	0.80	+1.4
3,373,205	-		PGA1_c32150	0.89	+0.1
3,373,273	-				-0.6
3,373,304	-				-0.7
3,373,305	-				+0.3
3,373,385	-				+0.2
3,373,390	+				-0.4
3,373,467	-				+1.4
3,373,492	-		PGA1_c32160	0.11	+0.0
3,373,552	-		PGA1_c32160	0.17	-0.9
3,373,571	+		PGA1_c32160	0.20	-0.4
3,373,579	-		PGA1_c32160	0.20	+0.2
3,373,606	+		PGA1_c32160	0.23	+0.5
3,373,626	+		PGA1_c32160	0.26	-0.8
3,373,629	-		PGA1_c32160	0.26	-0.8
3,373,674	+		PGA1_c32160	0.31	-0.2
3,373,736	-		PGA1_c32160	0.38	-1.6
3,373,738	+		PGA1_c32160	0.38	-0.2
3,373,743	+		PGA1_c32160	0.38	+1.0
3,373,743	+		PGA1_c32160	0.38	-1.5
3,373,751	-		PGA1_c32160	0.39	+0.6
3,373,770	-		PGA1_c32160	0.41	-1.7
3,373,861	-		PGA1_c32160	0.51	-2.6
3,373,869	+		PGA1_c32160	0.52	-1.0
3,373,959	+		PGA1_c32160	0.62	-0.5
3,373,993	+		PGA1_c32160	0.66	-0.2
3,374,008	+		PGA1_c32160	0.67	+0.1
3,374,008	+		PGA1_c32160	0.67	-0.6
3,374,016	-		PGA1_c32160	0.68	-0.9
3,374,085	-		PGA1_c32160	0.76	+0.2
3,374,114	+		PGA1_c32160	0.79	-0.9
3,374,114	+		PGA1_c32160	0.79	-1.4
3,374,197	-		PGA1_c32160	0.88	-0.7
3,374,300	+				-0.3
3,374,373	+				+0.5
3,374,439	+				-0.2
3,374,510	+				+0.8
3,374,510	+				+0.4
3,374,510	+				-0.5
3,374,510	+				-1.2
3,374,510	+				-0.3
3,374,510	+				+0.6
3,374,510	+				+1.4
3,374,510	+				-0.6
3,374,510	+				+0.2
3,374,510	+				+1.8
3,374,510	+				+1.3
3,374,510	+				+0.8
3,374,510	+				-1.6
3,374,510	+				+0.9
3,374,510	+				+0.4
3,374,510	+				-0.2
3,374,510	+				-0.2
3,374,510	+				-1.4
3,374,510	+				-0.7
3,374,510	+				-1.5
3,374,510	+				+0.1
3,374,510	+				-1.5
3,374,510	+				+1.2
3,374,510	+				+1.4
3,374,510	+				-0.1
3,374,510	+				+0.1
3,374,510	+				+0.7
3,374,510	+				+0.5
3,374,510	+				+0.5
3,374,510	+				-0.6
3,374,510	+				-0.4
3,374,510	+				-0.9
3,374,510	+				-0.4
3,374,510	+				-0.3
3,374,510	+				+0.6
3,374,510	+				-0.0
3,374,510	+				-0.7
3,374,510	+				-0.1
3,374,510	+				-0.7
3,374,518	+				-1.4
3,374,518	-				-0.3
3,374,518	-				-0.2
3,374,518	-				-0.1
3,374,518	-				+0.4
3,374,518	-				+0.2
3,374,518	-				-0.5
3,374,518	-				+0.0
3,374,518	-				-0.6
3,374,518	-				-0.9
3,374,518	-				+0.8
3,374,518	-				-0.4
3,374,518	-				-0.1
3,374,518	-				-0.2
3,374,518	-				+0.5
3,374,518	-				+1.4
3,374,518	-				+1.8
3,374,518	-				+0.3
3,374,518	-				+0.3
3,374,518	-				+0.0
3,374,518	-				-0.8
3,374,518	-				+0.4
3,374,518	-				+0.5
3,374,518	-				-0.4
3,374,518	-				-1.4
3,374,518	-				-0.6
3,374,518	-				+0.2
3,374,518	-				-0.7
3,374,518	-				+0.5
3,374,518	-				+1.0
3,374,518	-				-0.2
3,374,518	-				-0.5
3,374,518	-				+1.1
3,374,518	-				-0.1
3,374,518	-				+1.4
3,374,518	-				-0.0
3,374,518	-				+0.8
3,374,518	-				-0.8
3,374,518	-				-0.2
3,374,518	-				-0.6
3,374,518	-				-0.8
3,374,518	-				+0.4
3,374,518	-				-0.6
3,374,518	-				+0.9
3,374,518	-				+1.0
3,374,518	-				+1.0
3,374,518	-				-0.4
3,374,518	-				+1.9
3,374,518	-				+0.2
3,374,518	-				+0.6
3,374,518	-				+0.5
3,374,518	-				+0.4
3,374,518	-				+0.2
3,374,518	-				+0.3
3,374,518	-				+0.1
3,374,518	-				+0.4
3,374,518	-				-0.4
3,374,518	-				-0.6
3,374,518	-				-1.0
3,374,518	-				-1.9
3,374,518	-				-0.1
3,374,518	-				-0.2
3,374,518	-				+1.4
3,374,518	-				+0.4
3,374,518	-				+0.0
3,374,518	-				+0.8
3,374,518	-				+0.1
3,374,518	-				+0.7
3,374,518	-				-1.0
3,374,518	-				+0.2
3,374,518	-				+0.2
3,374,518	-				-1.4
3,374,518	-				-0.5
3,374,518	-				+0.7
3,374,518	-				-0.0
3,374,518	-				+0.5
3,374,518	-				-1.0
3,374,519	-				-0.0
3,374,523	+				+1.8
3,374,526	-				+0.2
3,374,531	-				-0.6
3,374,532	+				-0.6
3,374,534	+				+0.0
3,374,536	-				+1.8
3,374,544	+				+0.5
3,374,551	+				+0.0
3,374,551	+				+0.2
3,374,572	-				+0.3
3,374,589	+		PGA1_c32170	0.13	+0.8
3,374,608	+		PGA1_c32170	0.22	-0.2
3,374,638	-		PGA1_c32170	0.36	-0.6
3,374,644	+		PGA1_c32170	0.39	+0.8
3,374,644	+		PGA1_c32170	0.39	+1.4
3,374,649	+		PGA1_c32170	0.41	-0.2
3,374,652	-		PGA1_c32170	0.43	-0.7
3,374,667	+		PGA1_c32170	0.50	+0.6
3,374,685	-		PGA1_c32170	0.59	+0.3
3,374,779	+				+0.6
3,374,784	+				+1.3
3,374,784	+				+0.4
3,374,797	+				-0.7
3,374,797	+				-0.8
3,374,797	+				+0.2
3,374,797	+				+0.4
3,374,797	+				+1.1
3,374,832	+				+1.1
3,374,832	+				-0.5
3,374,832	+				-0.2
3,374,832	+				+0.2
3,374,832	+				-0.3
3,374,832	+				-0.2
3,374,832	+				-1.4
3,374,832	+				+1.5
3,374,832	+				-0.4
3,374,840	-				+0.7
3,374,840	-				+0.8
3,374,840	-				+0.4
3,374,840	-				+1.1
3,374,879	+		PGA1_c32180	0.10	-0.7
3,374,995	-		PGA1_c32180	0.22	-0.4
3,375,033	-		PGA1_c32180	0.26	+1.0
3,375,039	-		PGA1_c32180	0.27	+1.0
3,375,079	+		PGA1_c32180	0.31	+0.2
3,375,087	-		PGA1_c32180	0.31	-1.0
3,375,087	-		PGA1_c32180	0.31	+0.2
3,375,087	-		PGA1_c32180	0.31	+0.2
3,375,096	+		PGA1_c32180	0.32	+0.2
3,375,096	+		PGA1_c32180	0.32	-0.9
3,375,153	+		PGA1_c32180	0.38	-1.8
3,375,182	-		PGA1_c32180	0.41	-0.6
3,375,235	-		PGA1_c32180	0.46	-0.0
3,375,277	-		PGA1_c32180	0.51	+0.2
3,375,287	+		PGA1_c32180	0.52	+0.7