Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13520 and BWI76_RS13525 are separated by 298 nucleotides BWI76_RS13525 and BWI76_RS13530 overlap by 4 nucleotides
BWI76_RS13520: BWI76_RS13520 - hypothetical protein, at 2,819,208 to 2,819,747
_RS13520
BWI76_RS13525: BWI76_RS13525 - putative luciferase-like monooxygenase, at 2,820,046 to 2,821,047
_RS13525
BWI76_RS13530: BWI76_RS13530 - amidohydrolase family protein, at 2,821,044 to 2,822,165
_RS13530
Position (kb)
2820
2821
2822 Strain fitness (log2 ratio)
-2
-1
0
1 at 2819.764 kb on + strand at 2819.772 kb on - strand at 2819.993 kb on + strand at 2820.358 kb on - strand, within BWI76_RS13525 at 2820.671 kb on + strand, within BWI76_RS13525 at 2820.911 kb on - strand, within BWI76_RS13525 at 2820.934 kb on + strand, within BWI76_RS13525 at 2820.990 kb on + strand at 2820.998 kb on - strand at 2821.427 kb on - strand, within BWI76_RS13530 at 2821.601 kb on - strand, within BWI76_RS13530 at 2821.712 kb on - strand, within BWI76_RS13530 at 2821.732 kb on - strand, within BWI76_RS13530 at 2821.811 kb on - strand, within BWI76_RS13530 at 2821.907 kb on + strand, within BWI76_RS13530 at 2821.907 kb on + strand, within BWI76_RS13530 at 2821.907 kb on + strand, within BWI76_RS13530 at 2821.954 kb on + strand, within BWI76_RS13530 at 2821.982 kb on + strand, within BWI76_RS13530 at 2822.029 kb on - strand, within BWI76_RS13530
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM remove 2,819,764 + +0.2 2,819,772 - -0.6 2,819,993 + -1.9 2,820,358 - BWI76_RS13525 0.31 -1.2 2,820,671 + BWI76_RS13525 0.62 -0.0 2,820,911 - BWI76_RS13525 0.86 -1.3 2,820,934 + BWI76_RS13525 0.89 -1.3 2,820,990 + -0.4 2,820,998 - -1.2 2,821,427 - BWI76_RS13530 0.34 -0.1 2,821,601 - BWI76_RS13530 0.50 -0.2 2,821,712 - BWI76_RS13530 0.60 -0.1 2,821,732 - BWI76_RS13530 0.61 -0.4 2,821,811 - BWI76_RS13530 0.68 -0.3 2,821,907 + BWI76_RS13530 0.77 -0.1 2,821,907 + BWI76_RS13530 0.77 -0.7 2,821,907 + BWI76_RS13530 0.77 -0.1 2,821,954 + BWI76_RS13530 0.81 -0.6 2,821,982 + BWI76_RS13530 0.84 +0.1 2,822,029 - BWI76_RS13530 0.88 +0.1
Or see this region's nucleotide sequence