Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS18525 and ABZR87_RS18530 are separated by 19 nucleotides ABZR87_RS18530 and ABZR87_RS18535 are separated by 141 nucleotides ABZR87_RS18535 and ABZR87_RS18540 are separated by 157 nucleotides
ABZR87_RS18525: ABZR87_RS18525 - cupin domain-containing protein, at 511,748 to 512,152
_RS18525
ABZR87_RS18530: ABZR87_RS18530 - SDR family oxidoreductase, at 512,172 to 512,924
_RS18530
ABZR87_RS18535: ABZR87_RS18535 - PLP-dependent aminotransferase family protein, at 513,066 to 514,619
_RS18535
ABZR87_RS18540: ABZR87_RS18540 - branched-chain amino acid aminotransferase, at 514,777 to 515,877
_RS18540
Position (kb) 513
514
515 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 512.174 kb on - strand at 512.329 kb on + strand, within ABZR87_RS18530 at 512.330 kb on - strand, within ABZR87_RS18530 at 512.475 kb on + strand, within ABZR87_RS18530 at 512.475 kb on + strand, within ABZR87_RS18530 at 512.552 kb on - strand, within ABZR87_RS18530 at 512.552 kb on - strand, within ABZR87_RS18530 at 512.552 kb on - strand, within ABZR87_RS18530 at 512.605 kb on + strand, within ABZR87_RS18530 at 512.605 kb on + strand, within ABZR87_RS18530 at 512.606 kb on - strand, within ABZR87_RS18530 at 512.850 kb on - strand at 512.907 kb on + strand at 512.955 kb on + strand at 512.956 kb on - strand at 512.956 kb on - strand at 512.956 kb on - strand at 512.956 kb on - strand at 512.965 kb on + strand at 512.966 kb on - strand at 512.966 kb on - strand at 513.074 kb on - strand at 513.074 kb on - strand at 513.225 kb on - strand, within ABZR87_RS18535 at 513.256 kb on - strand, within ABZR87_RS18535 at 513.256 kb on - strand, within ABZR87_RS18535 at 513.279 kb on + strand, within ABZR87_RS18535 at 513.280 kb on - strand, within ABZR87_RS18535 at 513.280 kb on - strand, within ABZR87_RS18535 at 513.280 kb on - strand, within ABZR87_RS18535 at 513.280 kb on - strand, within ABZR87_RS18535 at 513.619 kb on - strand, within ABZR87_RS18535 at 513.619 kb on - strand, within ABZR87_RS18535 at 513.619 kb on - strand, within ABZR87_RS18535 at 513.619 kb on - strand, within ABZR87_RS18535 at 513.753 kb on + strand, within ABZR87_RS18535 at 513.753 kb on + strand, within ABZR87_RS18535 at 513.985 kb on - strand, within ABZR87_RS18535 at 514.002 kb on + strand, within ABZR87_RS18535 at 514.060 kb on - strand, within ABZR87_RS18535 at 514.060 kb on - strand, within ABZR87_RS18535 at 514.107 kb on + strand, within ABZR87_RS18535 at 514.108 kb on - strand, within ABZR87_RS18535 at 514.186 kb on + strand, within ABZR87_RS18535 at 514.187 kb on - strand, within ABZR87_RS18535 at 514.187 kb on - strand, within ABZR87_RS18535 at 514.187 kb on - strand, within ABZR87_RS18535 at 514.258 kb on - strand, within ABZR87_RS18535 at 514.453 kb on - strand, within ABZR87_RS18535 at 514.684 kb on + strand at 514.685 kb on + strand at 514.685 kb on + strand at 514.685 kb on + strand at 514.685 kb on + strand at 514.685 kb on + strand at 514.685 kb on + strand at 514.685 kb on + strand at 514.685 kb on + strand at 514.685 kb on + strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.686 kb on - strand at 514.697 kb on + strand at 514.698 kb on - strand at 514.698 kb on - strand at 514.777 kb on - strand at 514.777 kb on - strand at 514.777 kb on - strand at 514.777 kb on - strand at 514.880 kb on + strand at 514.910 kb on - strand, within ABZR87_RS18540 at 514.994 kb on - strand, within ABZR87_RS18540 at 514.994 kb on - strand, within ABZR87_RS18540 at 515.026 kb on + strand, within ABZR87_RS18540 at 515.026 kb on + strand, within ABZR87_RS18540 at 515.206 kb on + strand, within ABZR87_RS18540 at 515.206 kb on + strand, within ABZR87_RS18540 at 515.267 kb on - strand, within ABZR87_RS18540 at 515.302 kb on + strand, within ABZR87_RS18540 at 515.302 kb on + strand, within ABZR87_RS18540 at 515.303 kb on - strand, within ABZR87_RS18540 at 515.303 kb on - strand, within ABZR87_RS18540 at 515.303 kb on - strand, within ABZR87_RS18540 at 515.353 kb on + strand, within ABZR87_RS18540 at 515.354 kb on - strand, within ABZR87_RS18540 at 515.354 kb on - strand, within ABZR87_RS18540 at 515.354 kb on - strand, within ABZR87_RS18540 at 515.354 kb on - strand, within ABZR87_RS18540 at 515.404 kb on + strand, within ABZR87_RS18540 at 515.404 kb on + strand, within ABZR87_RS18540 at 515.404 kb on + strand, within ABZR87_RS18540 at 515.404 kb on + strand, within ABZR87_RS18540 at 515.404 kb on + strand, within ABZR87_RS18540 at 515.404 kb on + strand, within ABZR87_RS18540 at 515.404 kb on + strand, within ABZR87_RS18540 at 515.405 kb on - strand, within ABZR87_RS18540 at 515.405 kb on - strand, within ABZR87_RS18540 at 515.405 kb on - strand, within ABZR87_RS18540 at 515.405 kb on - strand, within ABZR87_RS18540 at 515.405 kb on - strand, within ABZR87_RS18540 at 515.405 kb on - strand, within ABZR87_RS18540
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 512,174 - -2.4 512,329 + ABZR87_RS18530 0.21 +0.7 512,330 - ABZR87_RS18530 0.21 -0.8 512,475 + ABZR87_RS18530 0.40 -0.5 512,475 + ABZR87_RS18530 0.40 -0.4 512,552 - ABZR87_RS18530 0.50 +0.1 512,552 - ABZR87_RS18530 0.50 +0.2 512,552 - ABZR87_RS18530 0.50 +0.6 512,605 + ABZR87_RS18530 0.58 -0.0 512,605 + ABZR87_RS18530 0.58 -0.9 512,606 - ABZR87_RS18530 0.58 -0.3 512,850 - +0.1 512,907 + +0.9 512,955 + -0.4 512,956 - +0.1 512,956 - -1.7 512,956 - +0.4 512,956 - -0.7 512,965 + -0.3 512,966 - +0.0 512,966 - -0.8 513,074 - -0.8 513,074 - +0.7 513,225 - ABZR87_RS18535 0.10 -0.5 513,256 - ABZR87_RS18535 0.12 +2.7 513,256 - ABZR87_RS18535 0.12 +0.8 513,279 + ABZR87_RS18535 0.14 -0.3 513,280 - ABZR87_RS18535 0.14 -0.1 513,280 - ABZR87_RS18535 0.14 -0.6 513,280 - ABZR87_RS18535 0.14 -0.2 513,280 - ABZR87_RS18535 0.14 -1.8 513,619 - ABZR87_RS18535 0.36 -1.9 513,619 - ABZR87_RS18535 0.36 +0.7 513,619 - ABZR87_RS18535 0.36 -0.8 513,619 - ABZR87_RS18535 0.36 -0.5 513,753 + ABZR87_RS18535 0.44 -0.1 513,753 + ABZR87_RS18535 0.44 -1.0 513,985 - ABZR87_RS18535 0.59 +0.5 514,002 + ABZR87_RS18535 0.60 +1.9 514,060 - ABZR87_RS18535 0.64 +1.1 514,060 - ABZR87_RS18535 0.64 -1.4 514,107 + ABZR87_RS18535 0.67 +0.2 514,108 - ABZR87_RS18535 0.67 -1.1 514,186 + ABZR87_RS18535 0.72 -0.2 514,187 - ABZR87_RS18535 0.72 -0.2 514,187 - ABZR87_RS18535 0.72 -3.3 514,187 - ABZR87_RS18535 0.72 +1.7 514,258 - ABZR87_RS18535 0.77 +0.7 514,453 - ABZR87_RS18535 0.89 -0.2 514,684 + -0.5 514,685 + -0.2 514,685 + -0.7 514,685 + -0.3 514,685 + +1.5 514,685 + -0.3 514,685 + +1.6 514,685 + -0.4 514,685 + -0.4 514,685 + -0.6 514,686 - -0.5 514,686 - +0.9 514,686 - +0.3 514,686 - +0.0 514,686 - -0.3 514,686 - +0.2 514,686 - -0.7 514,686 - +1.2 514,686 - -0.7 514,686 - +1.1 514,686 - -1.0 514,697 + -0.6 514,698 - +1.2 514,698 - +0.6 514,777 - -0.5 514,777 - -1.0 514,777 - +1.7 514,777 - -2.4 514,880 + -0.7 514,910 - ABZR87_RS18540 0.12 -2.2 514,994 - ABZR87_RS18540 0.20 -0.2 514,994 - ABZR87_RS18540 0.20 -0.1 515,026 + ABZR87_RS18540 0.23 +0.0 515,026 + ABZR87_RS18540 0.23 -1.1 515,206 + ABZR87_RS18540 0.39 -0.8 515,206 + ABZR87_RS18540 0.39 -0.5 515,267 - ABZR87_RS18540 0.45 -0.9 515,302 + ABZR87_RS18540 0.48 -1.3 515,302 + ABZR87_RS18540 0.48 +0.7 515,303 - ABZR87_RS18540 0.48 -0.8 515,303 - ABZR87_RS18540 0.48 -2.6 515,303 - ABZR87_RS18540 0.48 -1.9 515,353 + ABZR87_RS18540 0.52 -2.6 515,354 - ABZR87_RS18540 0.52 -1.7 515,354 - ABZR87_RS18540 0.52 +0.4 515,354 - ABZR87_RS18540 0.52 -2.3 515,354 - ABZR87_RS18540 0.52 -1.1 515,404 + ABZR87_RS18540 0.57 -0.7 515,404 + ABZR87_RS18540 0.57 -0.9 515,404 + ABZR87_RS18540 0.57 -0.8 515,404 + ABZR87_RS18540 0.57 -0.9 515,404 + ABZR87_RS18540 0.57 -0.2 515,404 + ABZR87_RS18540 0.57 -0.3 515,404 + ABZR87_RS18540 0.57 -0.7 515,405 - ABZR87_RS18540 0.57 +0.7 515,405 - ABZR87_RS18540 0.57 -1.0 515,405 - ABZR87_RS18540 0.57 +0.0 515,405 - ABZR87_RS18540 0.57 -1.1 515,405 - ABZR87_RS18540 0.57 -1.8 515,405 - ABZR87_RS18540 0.57 -1.3
Or see this region's nucleotide sequence