Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16310 and ABZR87_RS16315 are separated by 123 nucleotides ABZR87_RS16315 and ABZR87_RS16320 are separated by 108 nucleotides ABZR87_RS16320 and ABZR87_RS16325 are separated by 445 nucleotides
ABZR87_RS16310: ABZR87_RS16310 - YhfC family glutamic-type intramembrane protease, at 10,709 to 11,509
_RS16310
ABZR87_RS16315: ABZR87_RS16315 - hypothetical protein, at 11,633 to 12,073
_RS16315
ABZR87_RS16320: ABZR87_RS16320 - PAS domain-containing protein, at 12,182 to 14,863
_RS16320
ABZR87_RS16325: ABZR87_RS16325 - ABC transporter substrate-binding protein, at 15,309 to 16,469
_RS16325
Position (kb) 12
13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 11.262 kb on + strand, within ABZR87_RS16310 at 11.262 kb on + strand, within ABZR87_RS16310 at 11.263 kb on - strand, within ABZR87_RS16310 at 11.263 kb on - strand, within ABZR87_RS16310 at 11.263 kb on - strand, within ABZR87_RS16310 at 11.325 kb on + strand, within ABZR87_RS16310 at 11.325 kb on + strand, within ABZR87_RS16310 at 11.325 kb on + strand, within ABZR87_RS16310 at 11.325 kb on + strand, within ABZR87_RS16310 at 11.325 kb on + strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.326 kb on - strand, within ABZR87_RS16310 at 11.549 kb on + strand at 11.549 kb on + strand at 11.549 kb on + strand at 11.549 kb on + strand at 11.549 kb on + strand at 11.549 kb on + strand at 11.550 kb on - strand at 11.550 kb on - strand at 11.550 kb on - strand at 11.550 kb on - strand at 11.588 kb on + strand at 11.588 kb on + strand at 11.588 kb on + strand at 11.589 kb on - strand at 11.589 kb on - strand at 11.589 kb on - strand at 11.589 kb on - strand at 11.593 kb on + strand at 11.593 kb on + strand at 11.593 kb on + strand at 11.593 kb on + strand at 11.593 kb on + strand at 11.593 kb on + strand at 11.594 kb on - strand at 11.594 kb on - strand at 11.594 kb on - strand at 11.594 kb on - strand at 11.594 kb on - strand at 11.632 kb on + strand at 11.632 kb on + strand at 11.633 kb on - strand at 11.682 kb on + strand, within ABZR87_RS16315 at 11.682 kb on + strand, within ABZR87_RS16315 at 11.682 kb on + strand, within ABZR87_RS16315 at 11.682 kb on + strand, within ABZR87_RS16315 at 11.683 kb on - strand, within ABZR87_RS16315 at 11.683 kb on - strand, within ABZR87_RS16315 at 11.683 kb on - strand, within ABZR87_RS16315 at 11.747 kb on + strand, within ABZR87_RS16315 at 11.747 kb on + strand, within ABZR87_RS16315 at 11.877 kb on - strand, within ABZR87_RS16315 at 11.948 kb on + strand, within ABZR87_RS16315 at 11.949 kb on - strand, within ABZR87_RS16315 at 11.949 kb on - strand, within ABZR87_RS16315 at 11.949 kb on - strand, within ABZR87_RS16315 at 11.949 kb on - strand, within ABZR87_RS16315 at 11.949 kb on - strand, within ABZR87_RS16315 at 12.053 kb on + strand at 12.053 kb on + strand at 12.053 kb on + strand at 12.054 kb on - strand at 12.054 kb on - strand at 12.113 kb on + strand at 12.113 kb on + strand at 12.113 kb on + strand at 12.113 kb on + strand at 12.114 kb on - strand at 12.114 kb on - strand at 12.114 kb on - strand at 12.114 kb on - strand at 12.114 kb on - strand at 12.114 kb on - strand at 12.114 kb on - strand at 12.114 kb on - strand at 12.114 kb on - strand at 12.133 kb on + strand at 12.133 kb on + strand at 12.134 kb on - strand at 12.302 kb on + strand at 12.365 kb on + strand at 12.365 kb on + strand at 12.366 kb on - strand at 12.366 kb on - strand at 12.366 kb on - strand at 12.443 kb on + strand at 12.569 kb on + strand, within ABZR87_RS16320 at 12.570 kb on - strand, within ABZR87_RS16320 at 12.570 kb on - strand, within ABZR87_RS16320 at 12.643 kb on + strand, within ABZR87_RS16320 at 12.713 kb on + strand, within ABZR87_RS16320 at 12.713 kb on + strand, within ABZR87_RS16320 at 12.714 kb on - strand, within ABZR87_RS16320 at 12.779 kb on + strand, within ABZR87_RS16320 at 12.779 kb on + strand, within ABZR87_RS16320 at 12.779 kb on + strand, within ABZR87_RS16320 at 12.780 kb on - strand, within ABZR87_RS16320 at 12.780 kb on - strand, within ABZR87_RS16320 at 12.780 kb on - strand, within ABZR87_RS16320 at 12.780 kb on - strand, within ABZR87_RS16320 at 12.780 kb on - strand, within ABZR87_RS16320 at 12.809 kb on + strand, within ABZR87_RS16320 at 12.809 kb on + strand, within ABZR87_RS16320 at 12.809 kb on + strand, within ABZR87_RS16320 at 12.810 kb on - strand, within ABZR87_RS16320 at 12.810 kb on - strand, within ABZR87_RS16320 at 12.810 kb on - strand, within ABZR87_RS16320 at 12.810 kb on - strand, within ABZR87_RS16320 at 12.811 kb on + strand, within ABZR87_RS16320 at 12.811 kb on + strand, within ABZR87_RS16320 at 13.035 kb on + strand, within ABZR87_RS16320 at 13.036 kb on - strand, within ABZR87_RS16320 at 13.036 kb on - strand, within ABZR87_RS16320 at 13.316 kb on + strand, within ABZR87_RS16320 at 13.316 kb on + strand, within ABZR87_RS16320 at 13.316 kb on + strand, within ABZR87_RS16320 at 13.317 kb on - strand, within ABZR87_RS16320 at 13.318 kb on + strand, within ABZR87_RS16320 at 13.318 kb on + strand, within ABZR87_RS16320 at 13.318 kb on + strand, within ABZR87_RS16320 at 13.318 kb on + strand, within ABZR87_RS16320 at 13.319 kb on - strand, within ABZR87_RS16320 at 13.319 kb on - strand, within ABZR87_RS16320 at 13.319 kb on - strand, within ABZR87_RS16320 at 13.319 kb on - strand, within ABZR87_RS16320 at 13.319 kb on - strand, within ABZR87_RS16320 at 13.331 kb on + strand, within ABZR87_RS16320 at 13.331 kb on + strand, within ABZR87_RS16320 at 13.331 kb on + strand, within ABZR87_RS16320 at 13.332 kb on - strand, within ABZR87_RS16320 at 13.377 kb on + strand, within ABZR87_RS16320 at 13.377 kb on + strand, within ABZR87_RS16320 at 13.377 kb on + strand, within ABZR87_RS16320 at 13.378 kb on - strand, within ABZR87_RS16320 at 13.378 kb on - strand, within ABZR87_RS16320 at 13.378 kb on - strand, within ABZR87_RS16320 at 13.378 kb on - strand, within ABZR87_RS16320 at 13.378 kb on - strand, within ABZR87_RS16320 at 13.378 kb on - strand, within ABZR87_RS16320 at 13.457 kb on + strand, within ABZR87_RS16320 at 13.458 kb on - strand, within ABZR87_RS16320 at 13.513 kb on + strand, within ABZR87_RS16320 at 13.513 kb on + strand, within ABZR87_RS16320 at 13.513 kb on + strand, within ABZR87_RS16320 at 13.513 kb on + strand, within ABZR87_RS16320 at 13.679 kb on + strand, within ABZR87_RS16320 at 13.679 kb on + strand, within ABZR87_RS16320 at 13.679 kb on + strand, within ABZR87_RS16320 at 13.679 kb on + strand, within ABZR87_RS16320 at 13.680 kb on - strand, within ABZR87_RS16320 at 13.680 kb on - strand, within ABZR87_RS16320 at 13.758 kb on - strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.912 kb on + strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.913 kb on - strand, within ABZR87_RS16320 at 13.919 kb on + strand, within ABZR87_RS16320 at 13.919 kb on + strand, within ABZR87_RS16320 at 13.919 kb on + strand, within ABZR87_RS16320 at 13.919 kb on + strand, within ABZR87_RS16320 at 13.920 kb on - strand, within ABZR87_RS16320 at 13.920 kb on - strand, within ABZR87_RS16320 at 13.920 kb on - strand, within ABZR87_RS16320 at 13.920 kb on - strand, within ABZR87_RS16320 at 13.920 kb on - strand, within ABZR87_RS16320 at 13.920 kb on - strand, within ABZR87_RS16320 at 14.088 kb on - strand, within ABZR87_RS16320 at 14.150 kb on + strand, within ABZR87_RS16320 at 14.150 kb on + strand, within ABZR87_RS16320 at 14.150 kb on + strand, within ABZR87_RS16320 at 14.150 kb on + strand, within ABZR87_RS16320 at 14.151 kb on - strand, within ABZR87_RS16320 at 14.255 kb on + strand, within ABZR87_RS16320 at 14.255 kb on + strand, within ABZR87_RS16320 at 14.255 kb on + strand, within ABZR87_RS16320 at 14.256 kb on - strand, within ABZR87_RS16320 at 14.755 kb on + strand at 14.755 kb on + strand at 14.755 kb on + strand at 14.755 kb on + strand at 14.756 kb on - strand at 14.756 kb on - strand at 14.756 kb on - strand at 14.756 kb on - strand at 14.801 kb on + strand at 14.802 kb on - strand at 14.802 kb on - strand at 14.802 kb on - strand at 14.802 kb on - strand at 14.802 kb on - strand at 14.802 kb on - strand at 14.802 kb on - strand at 14.802 kb on - strand at 14.802 kb on - strand at 14.919 kb on + strand at 14.920 kb on - strand at 14.920 kb on - strand at 15.006 kb on + strand at 15.441 kb on + strand, within ABZR87_RS16325 at 15.823 kb on - strand, within ABZR87_RS16325 at 15.823 kb on - strand, within ABZR87_RS16325
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 11,262 + ABZR87_RS16310 0.69 +0.1 11,262 + ABZR87_RS16310 0.69 -1.5 11,263 - ABZR87_RS16310 0.69 -1.3 11,263 - ABZR87_RS16310 0.69 +0.3 11,263 - ABZR87_RS16310 0.69 -0.7 11,325 + ABZR87_RS16310 0.77 -0.3 11,325 + ABZR87_RS16310 0.77 -0.8 11,325 + ABZR87_RS16310 0.77 +0.1 11,325 + ABZR87_RS16310 0.77 +0.3 11,325 + ABZR87_RS16310 0.77 +0.5 11,326 - ABZR87_RS16310 0.77 -0.3 11,326 - ABZR87_RS16310 0.77 -1.7 11,326 - ABZR87_RS16310 0.77 +0.0 11,326 - ABZR87_RS16310 0.77 +0.7 11,326 - ABZR87_RS16310 0.77 -0.6 11,326 - ABZR87_RS16310 0.77 -0.1 11,326 - ABZR87_RS16310 0.77 -0.6 11,326 - ABZR87_RS16310 0.77 +0.3 11,326 - ABZR87_RS16310 0.77 -0.3 11,326 - ABZR87_RS16310 0.77 +1.2 11,549 + +0.6 11,549 + -0.4 11,549 + +0.4 11,549 + +1.1 11,549 + -0.4 11,549 + -0.7 11,550 - +0.8 11,550 - -0.6 11,550 - -0.6 11,550 - -1.7 11,588 + +0.5 11,588 + +0.9 11,588 + -0.1 11,589 - -0.7 11,589 - -1.1 11,589 - +0.3 11,589 - -0.5 11,593 + +0.1 11,593 + +0.9 11,593 + -0.6 11,593 + -0.1 11,593 + +0.6 11,593 + -0.1 11,594 - -0.3 11,594 - -0.2 11,594 - +1.7 11,594 - -0.2 11,594 - -0.7 11,632 + -0.2 11,632 + -1.1 11,633 - +0.3 11,682 + ABZR87_RS16315 0.11 -0.7 11,682 + ABZR87_RS16315 0.11 -0.3 11,682 + ABZR87_RS16315 0.11 +0.3 11,682 + ABZR87_RS16315 0.11 +0.6 11,683 - ABZR87_RS16315 0.11 +1.0 11,683 - ABZR87_RS16315 0.11 +0.1 11,683 - ABZR87_RS16315 0.11 +0.2 11,747 + ABZR87_RS16315 0.26 -0.4 11,747 + ABZR87_RS16315 0.26 -0.0 11,877 - ABZR87_RS16315 0.55 -0.6 11,948 + ABZR87_RS16315 0.71 +0.5 11,949 - ABZR87_RS16315 0.72 -0.3 11,949 - ABZR87_RS16315 0.72 +0.3 11,949 - ABZR87_RS16315 0.72 +0.0 11,949 - ABZR87_RS16315 0.72 -0.8 11,949 - ABZR87_RS16315 0.72 +0.6 12,053 + +1.3 12,053 + +2.5 12,053 + -0.3 12,054 - +0.9 12,054 - -0.0 12,113 + -0.0 12,113 + +0.3 12,113 + -3.1 12,113 + +0.7 12,114 - -0.6 12,114 - -0.2 12,114 - -0.2 12,114 - -0.5 12,114 - -0.1 12,114 - -0.4 12,114 - -1.4 12,114 - +1.2 12,114 - +1.1 12,133 + -1.0 12,133 + -0.0 12,134 - -0.3 12,302 + -2.5 12,365 + +0.6 12,365 + -0.5 12,366 - -1.0 12,366 - +0.4 12,366 - -0.1 12,443 + +1.2 12,569 + ABZR87_RS16320 0.14 +1.5 12,570 - ABZR87_RS16320 0.14 -0.5 12,570 - ABZR87_RS16320 0.14 -0.7 12,643 + ABZR87_RS16320 0.17 -0.1 12,713 + ABZR87_RS16320 0.20 +0.3 12,713 + ABZR87_RS16320 0.20 -0.1 12,714 - ABZR87_RS16320 0.20 +1.1 12,779 + ABZR87_RS16320 0.22 +0.3 12,779 + ABZR87_RS16320 0.22 -0.1 12,779 + ABZR87_RS16320 0.22 +0.3 12,780 - ABZR87_RS16320 0.22 +0.3 12,780 - ABZR87_RS16320 0.22 +0.1 12,780 - ABZR87_RS16320 0.22 -1.3 12,780 - ABZR87_RS16320 0.22 +0.1 12,780 - ABZR87_RS16320 0.22 -0.4 12,809 + ABZR87_RS16320 0.23 +1.1 12,809 + ABZR87_RS16320 0.23 -0.3 12,809 + ABZR87_RS16320 0.23 -0.9 12,810 - ABZR87_RS16320 0.23 +0.7 12,810 - ABZR87_RS16320 0.23 +0.3 12,810 - ABZR87_RS16320 0.23 -2.0 12,810 - ABZR87_RS16320 0.23 -0.3 12,811 + ABZR87_RS16320 0.23 -0.5 12,811 + ABZR87_RS16320 0.23 -0.7 13,035 + ABZR87_RS16320 0.32 -1.4 13,036 - ABZR87_RS16320 0.32 -0.8 13,036 - ABZR87_RS16320 0.32 -0.6 13,316 + ABZR87_RS16320 0.42 -1.3 13,316 + ABZR87_RS16320 0.42 +0.3 13,316 + ABZR87_RS16320 0.42 +1.1 13,317 - ABZR87_RS16320 0.42 -0.4 13,318 + ABZR87_RS16320 0.42 -0.7 13,318 + ABZR87_RS16320 0.42 -0.0 13,318 + ABZR87_RS16320 0.42 +1.2 13,318 + ABZR87_RS16320 0.42 +0.9 13,319 - ABZR87_RS16320 0.42 -0.0 13,319 - ABZR87_RS16320 0.42 -0.2 13,319 - ABZR87_RS16320 0.42 +1.9 13,319 - ABZR87_RS16320 0.42 -0.3 13,319 - ABZR87_RS16320 0.42 -0.7 13,331 + ABZR87_RS16320 0.43 -0.1 13,331 + ABZR87_RS16320 0.43 -0.5 13,331 + ABZR87_RS16320 0.43 +0.7 13,332 - ABZR87_RS16320 0.43 -0.2 13,377 + ABZR87_RS16320 0.45 -0.2 13,377 + ABZR87_RS16320 0.45 -0.2 13,377 + ABZR87_RS16320 0.45 +0.3 13,378 - ABZR87_RS16320 0.45 -1.0 13,378 - ABZR87_RS16320 0.45 -0.0 13,378 - ABZR87_RS16320 0.45 +1.2 13,378 - ABZR87_RS16320 0.45 -0.8 13,378 - ABZR87_RS16320 0.45 -1.0 13,378 - ABZR87_RS16320 0.45 +0.5 13,457 + ABZR87_RS16320 0.48 -0.7 13,458 - ABZR87_RS16320 0.48 -0.7 13,513 + ABZR87_RS16320 0.50 -0.7 13,513 + ABZR87_RS16320 0.50 -0.9 13,513 + ABZR87_RS16320 0.50 -0.8 13,513 + ABZR87_RS16320 0.50 +0.3 13,679 + ABZR87_RS16320 0.56 -3.0 13,679 + ABZR87_RS16320 0.56 -0.5 13,679 + ABZR87_RS16320 0.56 -1.8 13,679 + ABZR87_RS16320 0.56 -0.2 13,680 - ABZR87_RS16320 0.56 +0.3 13,680 - ABZR87_RS16320 0.56 +0.0 13,758 - ABZR87_RS16320 0.59 -0.9 13,912 + ABZR87_RS16320 0.65 -1.3 13,912 + ABZR87_RS16320 0.65 +0.1 13,912 + ABZR87_RS16320 0.65 -1.2 13,912 + ABZR87_RS16320 0.65 -1.1 13,912 + ABZR87_RS16320 0.65 +1.0 13,912 + ABZR87_RS16320 0.65 +0.4 13,912 + ABZR87_RS16320 0.65 -1.1 13,912 + ABZR87_RS16320 0.65 -0.1 13,912 + ABZR87_RS16320 0.65 +0.3 13,913 - ABZR87_RS16320 0.65 +0.0 13,913 - ABZR87_RS16320 0.65 -1.8 13,913 - ABZR87_RS16320 0.65 -1.3 13,913 - ABZR87_RS16320 0.65 -2.5 13,913 - ABZR87_RS16320 0.65 -1.3 13,913 - ABZR87_RS16320 0.65 +0.3 13,913 - ABZR87_RS16320 0.65 +0.4 13,913 - ABZR87_RS16320 0.65 -0.4 13,913 - ABZR87_RS16320 0.65 -0.9 13,919 + ABZR87_RS16320 0.65 +0.8 13,919 + ABZR87_RS16320 0.65 +0.5 13,919 + ABZR87_RS16320 0.65 +0.5 13,919 + ABZR87_RS16320 0.65 -0.0 13,920 - ABZR87_RS16320 0.65 -0.2 13,920 - ABZR87_RS16320 0.65 +0.2 13,920 - ABZR87_RS16320 0.65 +0.7 13,920 - ABZR87_RS16320 0.65 -0.5 13,920 - ABZR87_RS16320 0.65 -0.2 13,920 - ABZR87_RS16320 0.65 +0.2 14,088 - ABZR87_RS16320 0.71 -0.2 14,150 + ABZR87_RS16320 0.73 -0.3 14,150 + ABZR87_RS16320 0.73 -0.4 14,150 + ABZR87_RS16320 0.73 +0.1 14,150 + ABZR87_RS16320 0.73 +0.7 14,151 - ABZR87_RS16320 0.73 -1.3 14,255 + ABZR87_RS16320 0.77 -0.5 14,255 + ABZR87_RS16320 0.77 +0.3 14,255 + ABZR87_RS16320 0.77 +1.1 14,256 - ABZR87_RS16320 0.77 -0.5 14,755 + +1.2 14,755 + -0.7 14,755 + +0.0 14,755 + +0.3 14,756 - -1.3 14,756 - -0.8 14,756 - -1.3 14,756 - -0.6 14,801 + -1.0 14,802 - -0.8 14,802 - -0.5 14,802 - +0.3 14,802 - -0.1 14,802 - -0.7 14,802 - +1.8 14,802 - +0.9 14,802 - -0.1 14,802 - -0.3 14,919 + +0.3 14,920 - +0.5 14,920 - +0.9 15,006 + +0.0 15,441 + ABZR87_RS16325 0.11 +2.3 15,823 - ABZR87_RS16325 0.44 -0.4 15,823 - ABZR87_RS16325 0.44 -1.0
Or see this region's nucleotide sequence