Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS14795 and ABZR87_RS14800 are separated by 84 nucleotides ABZR87_RS14800 and ABZR87_RS14805 are separated by 137 nucleotides ABZR87_RS14805 and ABZR87_RS14810 are separated by 44 nucleotides
ABZR87_RS14795: ABZR87_RS14795 - acyl-CoA dehydrogenase family protein, at 3,123,087 to 3,124,283
_RS14795
ABZR87_RS14800: ABZR87_RS14800 - DUF1178 family protein, at 3,124,368 to 3,124,829
_RS14800
ABZR87_RS14805: ABZR87_RS14805 - NUDIX hydrolase, at 3,124,967 to 3,125,578
_RS14805
ABZR87_RS14810: ABZR87_RS14810 - DUF2818 family protein, at 3,125,623 to 3,125,937
_RS14810
Position (kb) 3124
3125 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2
3 at 3123.408 kb on + strand, within ABZR87_RS14795 at 3123.408 kb on + strand, within ABZR87_RS14795 at 3123.408 kb on + strand, within ABZR87_RS14795 at 3123.444 kb on + strand, within ABZR87_RS14795 at 3123.548 kb on + strand, within ABZR87_RS14795 at 3123.568 kb on + strand, within ABZR87_RS14795 at 3123.569 kb on - strand, within ABZR87_RS14795 at 3123.569 kb on - strand, within ABZR87_RS14795 at 3123.569 kb on - strand, within ABZR87_RS14795 at 3123.569 kb on - strand, within ABZR87_RS14795 at 3123.577 kb on + strand, within ABZR87_RS14795 at 3123.692 kb on + strand, within ABZR87_RS14795 at 3123.692 kb on + strand, within ABZR87_RS14795 at 3123.692 kb on + strand, within ABZR87_RS14795 at 3123.832 kb on + strand, within ABZR87_RS14795 at 3123.832 kb on + strand, within ABZR87_RS14795 at 3123.833 kb on - strand, within ABZR87_RS14795 at 3123.833 kb on - strand, within ABZR87_RS14795 at 3124.270 kb on + strand at 3124.369 kb on + strand at 3124.369 kb on + strand at 3124.369 kb on + strand at 3124.370 kb on - strand at 3124.495 kb on + strand, within ABZR87_RS14800 at 3124.496 kb on - strand, within ABZR87_RS14800 at 3124.496 kb on - strand, within ABZR87_RS14800 at 3124.544 kb on + strand, within ABZR87_RS14800 at 3124.544 kb on + strand, within ABZR87_RS14800 at 3124.576 kb on + strand, within ABZR87_RS14800 at 3124.576 kb on + strand, within ABZR87_RS14800 at 3124.577 kb on - strand, within ABZR87_RS14800 at 3124.857 kb on + strand at 3124.858 kb on - strand at 3124.858 kb on - strand at 3124.891 kb on + strand at 3125.157 kb on + strand, within ABZR87_RS14805 at 3125.158 kb on - strand, within ABZR87_RS14805 at 3125.181 kb on + strand, within ABZR87_RS14805 at 3125.211 kb on + strand, within ABZR87_RS14805 at 3125.212 kb on - strand, within ABZR87_RS14805 at 3125.212 kb on - strand, within ABZR87_RS14805 at 3125.212 kb on - strand, within ABZR87_RS14805 at 3125.413 kb on - strand, within ABZR87_RS14805 at 3125.413 kb on - strand, within ABZR87_RS14805 at 3125.476 kb on + strand, within ABZR87_RS14805 at 3125.625 kb on - strand at 3125.625 kb on - strand at 3125.654 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 3,123,408 + ABZR87_RS14795 0.27 -3.9 3,123,408 + ABZR87_RS14795 0.27 -2.5 3,123,408 + ABZR87_RS14795 0.27 -3.3 3,123,444 + ABZR87_RS14795 0.30 -2.9 3,123,548 + ABZR87_RS14795 0.39 -2.7 3,123,568 + ABZR87_RS14795 0.40 -2.7 3,123,569 - ABZR87_RS14795 0.40 -2.7 3,123,569 - ABZR87_RS14795 0.40 -2.9 3,123,569 - ABZR87_RS14795 0.40 -4.1 3,123,569 - ABZR87_RS14795 0.40 -2.1 3,123,577 + ABZR87_RS14795 0.41 -5.1 3,123,692 + ABZR87_RS14795 0.51 -4.1 3,123,692 + ABZR87_RS14795 0.51 -3.1 3,123,692 + ABZR87_RS14795 0.51 -3.9 3,123,832 + ABZR87_RS14795 0.62 -2.7 3,123,832 + ABZR87_RS14795 0.62 -4.0 3,123,833 - ABZR87_RS14795 0.62 -4.6 3,123,833 - ABZR87_RS14795 0.62 -3.8 3,124,270 + -1.5 3,124,369 + -2.5 3,124,369 + -2.5 3,124,369 + -3.8 3,124,370 - -0.4 3,124,495 + ABZR87_RS14800 0.27 -4.2 3,124,496 - ABZR87_RS14800 0.28 -4.5 3,124,496 - ABZR87_RS14800 0.28 -3.3 3,124,544 + ABZR87_RS14800 0.38 -3.7 3,124,544 + ABZR87_RS14800 0.38 -3.7 3,124,576 + ABZR87_RS14800 0.45 -3.4 3,124,576 + ABZR87_RS14800 0.45 -4.7 3,124,577 - ABZR87_RS14800 0.45 -6.2 3,124,857 + -2.9 3,124,858 - -2.9 3,124,858 - -2.8 3,124,891 + -0.2 3,125,157 + ABZR87_RS14805 0.31 -1.7 3,125,158 - ABZR87_RS14805 0.31 -0.9 3,125,181 + ABZR87_RS14805 0.35 +3.0 3,125,211 + ABZR87_RS14805 0.40 -0.1 3,125,212 - ABZR87_RS14805 0.40 -0.1 3,125,212 - ABZR87_RS14805 0.40 +0.3 3,125,212 - ABZR87_RS14805 0.40 +0.2 3,125,413 - ABZR87_RS14805 0.73 +1.0 3,125,413 - ABZR87_RS14805 0.73 +1.1 3,125,476 + ABZR87_RS14805 0.83 -0.1 3,125,625 - -1.9 3,125,625 - -0.0 3,125,654 + -2.3
Or see this region's nucleotide sequence