Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS08030 and ABZR87_RS08035 are separated by 34 nucleotides ABZR87_RS08035 and ABZR87_RS08040 are separated by 25 nucleotides
ABZR87_RS08030: ABZR87_RS08030 - alpha/beta fold hydrolase, at 1,706,017 to 1,707,093
_RS08030
ABZR87_RS08035: ABZR87_RS08035 - nuclear transport factor 2 family protein, at 1,707,128 to 1,707,568
_RS08035
ABZR87_RS08040: ABZR87_RS08040 - lipopolysaccharide heptosyltransferase II, at 1,707,594 to 1,708,619
_RS08040
Position (kb)
1707
1708 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1706.297 kb on + strand, within ABZR87_RS08030 at 1706.298 kb on - strand, within ABZR87_RS08030 at 1706.390 kb on + strand, within ABZR87_RS08030 at 1706.391 kb on - strand, within ABZR87_RS08030 at 1706.391 kb on - strand, within ABZR87_RS08030 at 1706.391 kb on - strand, within ABZR87_RS08030 at 1706.459 kb on + strand, within ABZR87_RS08030 at 1706.459 kb on + strand, within ABZR87_RS08030 at 1706.459 kb on + strand, within ABZR87_RS08030 at 1706.459 kb on + strand, within ABZR87_RS08030 at 1706.460 kb on - strand, within ABZR87_RS08030 at 1706.543 kb on + strand, within ABZR87_RS08030 at 1706.543 kb on + strand, within ABZR87_RS08030 at 1706.574 kb on - strand, within ABZR87_RS08030 at 1706.574 kb on - strand, within ABZR87_RS08030 at 1706.574 kb on - strand, within ABZR87_RS08030 at 1706.574 kb on - strand, within ABZR87_RS08030 at 1706.652 kb on - strand, within ABZR87_RS08030 at 1706.653 kb on + strand, within ABZR87_RS08030 at 1706.653 kb on + strand, within ABZR87_RS08030 at 1706.653 kb on + strand, within ABZR87_RS08030 at 1706.653 kb on + strand, within ABZR87_RS08030 at 1706.653 kb on + strand, within ABZR87_RS08030 at 1706.653 kb on + strand, within ABZR87_RS08030 at 1706.653 kb on + strand, within ABZR87_RS08030 at 1706.654 kb on - strand, within ABZR87_RS08030 at 1706.654 kb on - strand, within ABZR87_RS08030 at 1706.654 kb on - strand, within ABZR87_RS08030 at 1706.654 kb on - strand, within ABZR87_RS08030 at 1706.654 kb on - strand, within ABZR87_RS08030 at 1706.699 kb on + strand, within ABZR87_RS08030 at 1706.699 kb on + strand, within ABZR87_RS08030 at 1706.699 kb on + strand, within ABZR87_RS08030 at 1706.700 kb on - strand, within ABZR87_RS08030 at 1706.802 kb on - strand, within ABZR87_RS08030 at 1706.802 kb on - strand, within ABZR87_RS08030 at 1707.129 kb on + strand at 1707.129 kb on + strand at 1707.129 kb on + strand at 1707.130 kb on - strand at 1707.130 kb on - strand at 1707.130 kb on - strand at 1707.240 kb on + strand, within ABZR87_RS08035 at 1707.240 kb on + strand, within ABZR87_RS08035 at 1707.241 kb on - strand, within ABZR87_RS08035 at 1707.255 kb on + strand, within ABZR87_RS08035 at 1707.255 kb on + strand, within ABZR87_RS08035 at 1707.256 kb on - strand, within ABZR87_RS08035 at 1707.256 kb on - strand, within ABZR87_RS08035 at 1707.517 kb on - strand, within ABZR87_RS08035 at 1707.517 kb on - strand, within ABZR87_RS08035 at 1707.595 kb on + strand at 1707.595 kb on + strand at 1707.725 kb on + strand, within ABZR87_RS08040 at 1707.726 kb on - strand, within ABZR87_RS08040 at 1707.726 kb on - strand, within ABZR87_RS08040 at 1707.778 kb on - strand, within ABZR87_RS08040 at 1707.778 kb on - strand, within ABZR87_RS08040 at 1707.778 kb on - strand, within ABZR87_RS08040 at 1708.054 kb on + strand, within ABZR87_RS08040 at 1708.291 kb on + strand, within ABZR87_RS08040 at 1708.292 kb on - strand, within ABZR87_RS08040 at 1708.292 kb on - strand, within ABZR87_RS08040 at 1708.360 kb on + strand, within ABZR87_RS08040 at 1708.360 kb on + strand, within ABZR87_RS08040 at 1708.360 kb on + strand, within ABZR87_RS08040 at 1708.361 kb on - strand, within ABZR87_RS08040 at 1708.361 kb on - strand, within ABZR87_RS08040 at 1708.361 kb on - strand, within ABZR87_RS08040 at 1708.361 kb on - strand, within ABZR87_RS08040 at 1708.361 kb on - strand, within ABZR87_RS08040 at 1708.407 kb on - strand, within ABZR87_RS08040 at 1708.407 kb on - strand, within ABZR87_RS08040
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 1,706,297 + ABZR87_RS08030 0.26 -0.4 1,706,298 - ABZR87_RS08030 0.26 +0.2 1,706,390 + ABZR87_RS08030 0.35 -0.1 1,706,391 - ABZR87_RS08030 0.35 +0.3 1,706,391 - ABZR87_RS08030 0.35 +0.2 1,706,391 - ABZR87_RS08030 0.35 +0.2 1,706,459 + ABZR87_RS08030 0.41 -0.7 1,706,459 + ABZR87_RS08030 0.41 +0.9 1,706,459 + ABZR87_RS08030 0.41 -2.0 1,706,459 + ABZR87_RS08030 0.41 -1.5 1,706,460 - ABZR87_RS08030 0.41 +0.3 1,706,543 + ABZR87_RS08030 0.49 +0.1 1,706,543 + ABZR87_RS08030 0.49 +0.1 1,706,574 - ABZR87_RS08030 0.52 -0.6 1,706,574 - ABZR87_RS08030 0.52 +1.0 1,706,574 - ABZR87_RS08030 0.52 +0.5 1,706,574 - ABZR87_RS08030 0.52 +0.2 1,706,652 - ABZR87_RS08030 0.59 +0.2 1,706,653 + ABZR87_RS08030 0.59 -1.1 1,706,653 + ABZR87_RS08030 0.59 -0.2 1,706,653 + ABZR87_RS08030 0.59 -0.4 1,706,653 + ABZR87_RS08030 0.59 -1.1 1,706,653 + ABZR87_RS08030 0.59 -0.6 1,706,653 + ABZR87_RS08030 0.59 +1.7 1,706,653 + ABZR87_RS08030 0.59 -0.3 1,706,654 - ABZR87_RS08030 0.59 -0.6 1,706,654 - ABZR87_RS08030 0.59 +0.0 1,706,654 - ABZR87_RS08030 0.59 +0.6 1,706,654 - ABZR87_RS08030 0.59 -1.7 1,706,654 - ABZR87_RS08030 0.59 +0.5 1,706,699 + ABZR87_RS08030 0.63 -0.3 1,706,699 + ABZR87_RS08030 0.63 -1.4 1,706,699 + ABZR87_RS08030 0.63 -1.2 1,706,700 - ABZR87_RS08030 0.63 -0.8 1,706,802 - ABZR87_RS08030 0.73 +0.6 1,706,802 - ABZR87_RS08030 0.73 +0.7 1,707,129 + +0.5 1,707,129 + +0.2 1,707,129 + -0.7 1,707,130 - -0.5 1,707,130 - +0.3 1,707,130 - +0.5 1,707,240 + ABZR87_RS08035 0.25 -0.3 1,707,240 + ABZR87_RS08035 0.25 -0.3 1,707,241 - ABZR87_RS08035 0.26 +0.1 1,707,255 + ABZR87_RS08035 0.29 -0.9 1,707,255 + ABZR87_RS08035 0.29 -0.3 1,707,256 - ABZR87_RS08035 0.29 -1.0 1,707,256 - ABZR87_RS08035 0.29 -0.4 1,707,517 - ABZR87_RS08035 0.88 -1.0 1,707,517 - ABZR87_RS08035 0.88 -1.1 1,707,595 + -1.3 1,707,595 + -0.8 1,707,725 + ABZR87_RS08040 0.13 +1.5 1,707,726 - ABZR87_RS08040 0.13 +3.0 1,707,726 - ABZR87_RS08040 0.13 +1.6 1,707,778 - ABZR87_RS08040 0.18 +1.7 1,707,778 - ABZR87_RS08040 0.18 +1.3 1,707,778 - ABZR87_RS08040 0.18 +1.4 1,708,054 + ABZR87_RS08040 0.45 +0.3 1,708,291 + ABZR87_RS08040 0.68 +1.0 1,708,292 - ABZR87_RS08040 0.68 -0.2 1,708,292 - ABZR87_RS08040 0.68 +0.7 1,708,360 + ABZR87_RS08040 0.75 +0.4 1,708,360 + ABZR87_RS08040 0.75 +0.4 1,708,360 + ABZR87_RS08040 0.75 +1.2 1,708,361 - ABZR87_RS08040 0.75 +1.0 1,708,361 - ABZR87_RS08040 0.75 +2.0 1,708,361 - ABZR87_RS08040 0.75 +0.1 1,708,361 - ABZR87_RS08040 0.75 +1.9 1,708,361 - ABZR87_RS08040 0.75 -0.3 1,708,407 - ABZR87_RS08040 0.79 +0.7 1,708,407 - ABZR87_RS08040 0.79 +1.2
Or see this region's nucleotide sequence