Experiment: Dodecandioic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03685 and ABZR87_RS03690 are separated by 182 nucleotides ABZR87_RS03690 and ABZR87_RS03695 are separated by 159 nucleotides ABZR87_RS03695 and ABZR87_RS03700 are separated by 19 nucleotides ABZR87_RS03700 and ABZR87_RS03705 are separated by 1 nucleotides
ABZR87_RS03685: ABZR87_RS03685 - PASTA domain-containing protein, at 768,113 to 769,072
_RS03685
ABZR87_RS03690: ABZR87_RS03690 - DUF305 domain-containing protein, at 769,255 to 769,770
_RS03690
ABZR87_RS03695: ABZR87_RS03695 - carboxymuconolactone decarboxylase family protein, at 769,930 to 770,262
_RS03695
ABZR87_RS03700: ABZR87_RS03700 - RNA polymerase sigma factor, at 770,282 to 770,839
_RS03700
ABZR87_RS03705: ABZR87_RS03705 - DUF2892 domain-containing protein, at 770,841 to 771,050
_RS03705
Position (kb) 769
770
771 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 768.968 kb on + strand, within ABZR87_RS03685 at 768.968 kb on + strand, within ABZR87_RS03685 at 768.968 kb on + strand, within ABZR87_RS03685 at 768.969 kb on - strand, within ABZR87_RS03685 at 768.969 kb on - strand, within ABZR87_RS03685 at 768.984 kb on - strand at 768.984 kb on - strand at 768.984 kb on - strand at 769.053 kb on - strand at 769.109 kb on + strand at 769.110 kb on - strand at 769.127 kb on + strand at 769.127 kb on + strand at 769.128 kb on - strand at 769.128 kb on - strand at 769.128 kb on - strand at 769.200 kb on + strand at 769.201 kb on - strand at 769.292 kb on + strand at 769.292 kb on + strand at 769.293 kb on - strand at 769.411 kb on + strand, within ABZR87_RS03690 at 769.411 kb on + strand, within ABZR87_RS03690 at 769.412 kb on - strand, within ABZR87_RS03690 at 769.425 kb on + strand, within ABZR87_RS03690 at 769.425 kb on + strand, within ABZR87_RS03690 at 769.425 kb on + strand, within ABZR87_RS03690 at 769.425 kb on + strand, within ABZR87_RS03690 at 769.426 kb on - strand, within ABZR87_RS03690 at 769.426 kb on - strand, within ABZR87_RS03690 at 769.487 kb on + strand, within ABZR87_RS03690 at 769.487 kb on + strand, within ABZR87_RS03690 at 769.487 kb on + strand, within ABZR87_RS03690 at 769.487 kb on + strand, within ABZR87_RS03690 at 769.487 kb on + strand, within ABZR87_RS03690 at 769.487 kb on + strand, within ABZR87_RS03690 at 769.487 kb on + strand, within ABZR87_RS03690 at 769.488 kb on - strand, within ABZR87_RS03690 at 769.488 kb on - strand, within ABZR87_RS03690 at 769.488 kb on - strand, within ABZR87_RS03690 at 769.592 kb on + strand, within ABZR87_RS03690 at 769.592 kb on + strand, within ABZR87_RS03690 at 769.592 kb on + strand, within ABZR87_RS03690 at 769.593 kb on - strand, within ABZR87_RS03690 at 769.593 kb on - strand, within ABZR87_RS03690 at 769.593 kb on - strand, within ABZR87_RS03690 at 769.593 kb on - strand, within ABZR87_RS03690 at 769.593 kb on - strand, within ABZR87_RS03690 at 769.593 kb on - strand, within ABZR87_RS03690 at 769.593 kb on - strand, within ABZR87_RS03690 at 769.675 kb on + strand, within ABZR87_RS03690 at 769.675 kb on + strand, within ABZR87_RS03690 at 769.676 kb on - strand, within ABZR87_RS03690 at 769.695 kb on - strand, within ABZR87_RS03690 at 769.695 kb on - strand, within ABZR87_RS03690 at 769.706 kb on + strand, within ABZR87_RS03690 at 769.706 kb on + strand, within ABZR87_RS03690 at 769.707 kb on - strand, within ABZR87_RS03690 at 769.707 kb on - strand, within ABZR87_RS03690 at 769.707 kb on - strand, within ABZR87_RS03690 at 769.763 kb on + strand at 769.763 kb on + strand at 769.764 kb on - strand at 769.764 kb on - strand at 769.764 kb on - strand at 769.764 kb on - strand at 769.764 kb on - strand at 769.764 kb on - strand at 769.852 kb on + strand at 769.853 kb on - strand at 769.853 kb on - strand at 769.853 kb on - strand at 769.853 kb on - strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.931 kb on + strand at 769.932 kb on - strand at 769.932 kb on - strand at 769.932 kb on - strand at 769.932 kb on - strand at 769.932 kb on - strand at 769.932 kb on - strand at 769.932 kb on - strand at 769.932 kb on - strand at 770.034 kb on + strand, within ABZR87_RS03695 at 770.062 kb on - strand, within ABZR87_RS03695 at 770.062 kb on - strand, within ABZR87_RS03695 at 770.062 kb on - strand, within ABZR87_RS03695 at 770.078 kb on + strand, within ABZR87_RS03695 at 770.078 kb on + strand, within ABZR87_RS03695 at 770.078 kb on + strand, within ABZR87_RS03695 at 770.078 kb on + strand, within ABZR87_RS03695 at 770.078 kb on + strand, within ABZR87_RS03695 at 770.079 kb on - strand, within ABZR87_RS03695 at 770.091 kb on + strand, within ABZR87_RS03695 at 770.092 kb on - strand, within ABZR87_RS03695 at 770.092 kb on - strand, within ABZR87_RS03695 at 770.092 kb on - strand, within ABZR87_RS03695 at 770.178 kb on + strand, within ABZR87_RS03695 at 770.249 kb on + strand at 770.249 kb on + strand at 770.250 kb on - strand at 770.250 kb on - strand at 770.284 kb on - strand at 770.320 kb on - strand at 770.399 kb on + strand, within ABZR87_RS03700 at 770.399 kb on + strand, within ABZR87_RS03700 at 770.399 kb on + strand, within ABZR87_RS03700 at 770.399 kb on + strand, within ABZR87_RS03700 at 770.400 kb on - strand, within ABZR87_RS03700 at 770.400 kb on - strand, within ABZR87_RS03700 at 770.400 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.464 kb on - strand, within ABZR87_RS03700 at 770.556 kb on + strand, within ABZR87_RS03700 at 770.556 kb on + strand, within ABZR87_RS03700 at 770.556 kb on + strand, within ABZR87_RS03700 at 770.557 kb on - strand, within ABZR87_RS03700 at 770.584 kb on + strand, within ABZR87_RS03700 at 770.585 kb on - strand, within ABZR87_RS03700 at 770.621 kb on + strand, within ABZR87_RS03700 at 770.622 kb on - strand, within ABZR87_RS03700 at 770.622 kb on - strand, within ABZR87_RS03700 at 770.652 kb on - strand, within ABZR87_RS03700 at 770.671 kb on - strand, within ABZR87_RS03700 at 770.747 kb on + strand, within ABZR87_RS03700 at 770.747 kb on + strand, within ABZR87_RS03700 at 770.795 kb on - strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.815 kb on + strand at 770.816 kb on - strand at 770.816 kb on - strand at 770.816 kb on - strand at 770.816 kb on - strand at 770.816 kb on - strand at 770.850 kb on + strand at 770.851 kb on - strand at 770.972 kb on + strand, within ABZR87_RS03705 at 770.973 kb on - strand, within ABZR87_RS03705 at 771.043 kb on + strand at 771.043 kb on + strand at 771.043 kb on + strand at 771.043 kb on + strand at 771.044 kb on - strand at 771.044 kb on - strand at 771.044 kb on - strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.050 kb on + strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.051 kb on - strand at 771.088 kb on + strand at 771.088 kb on + strand at 771.088 kb on + strand at 771.088 kb on + strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.089 kb on - strand at 771.125 kb on + strand at 771.129 kb on + strand at 771.130 kb on - strand at 771.130 kb on - strand at 771.130 kb on - strand at 771.130 kb on - strand at 771.130 kb on - strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.152 kb on + strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.153 kb on - strand at 771.198 kb on + strand at 771.198 kb on + strand at 771.198 kb on + strand at 771.198 kb on + strand at 771.198 kb on + strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.199 kb on - strand at 771.199 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dodecandioic (C) remove 768,968 + ABZR87_RS03685 0.89 -1.4 768,968 + ABZR87_RS03685 0.89 +0.1 768,968 + ABZR87_RS03685 0.89 -1.1 768,969 - ABZR87_RS03685 0.89 +0.2 768,969 - ABZR87_RS03685 0.89 -0.3 768,984 - +0.1 768,984 - -0.2 768,984 - -0.9 769,053 - -1.2 769,109 + +0.4 769,110 - -0.0 769,127 + +0.3 769,127 + +2.1 769,128 - +0.2 769,128 - +1.4 769,128 - +0.3 769,200 + -0.3 769,201 - -0.0 769,292 + +0.9 769,292 + -1.0 769,293 - +0.7 769,411 + ABZR87_RS03690 0.30 +0.2 769,411 + ABZR87_RS03690 0.30 -0.5 769,412 - ABZR87_RS03690 0.30 +0.6 769,425 + ABZR87_RS03690 0.33 -0.3 769,425 + ABZR87_RS03690 0.33 +0.3 769,425 + ABZR87_RS03690 0.33 +0.1 769,425 + ABZR87_RS03690 0.33 +0.6 769,426 - ABZR87_RS03690 0.33 -0.7 769,426 - ABZR87_RS03690 0.33 +0.3 769,487 + ABZR87_RS03690 0.45 -0.4 769,487 + ABZR87_RS03690 0.45 -1.2 769,487 + ABZR87_RS03690 0.45 +0.8 769,487 + ABZR87_RS03690 0.45 +1.5 769,487 + ABZR87_RS03690 0.45 +1.0 769,487 + ABZR87_RS03690 0.45 +0.8 769,487 + ABZR87_RS03690 0.45 -0.2 769,488 - ABZR87_RS03690 0.45 +0.1 769,488 - ABZR87_RS03690 0.45 -1.1 769,488 - ABZR87_RS03690 0.45 +0.5 769,592 + ABZR87_RS03690 0.65 +0.7 769,592 + ABZR87_RS03690 0.65 +0.6 769,592 + ABZR87_RS03690 0.65 +0.6 769,593 - ABZR87_RS03690 0.66 -0.5 769,593 - ABZR87_RS03690 0.66 +0.5 769,593 - ABZR87_RS03690 0.66 -1.2 769,593 - ABZR87_RS03690 0.66 +0.1 769,593 - ABZR87_RS03690 0.66 +1.1 769,593 - ABZR87_RS03690 0.66 -2.1 769,593 - ABZR87_RS03690 0.66 +0.0 769,675 + ABZR87_RS03690 0.81 -0.7 769,675 + ABZR87_RS03690 0.81 -0.6 769,676 - ABZR87_RS03690 0.82 +1.6 769,695 - ABZR87_RS03690 0.85 +0.6 769,695 - ABZR87_RS03690 0.85 +0.5 769,706 + ABZR87_RS03690 0.87 -0.3 769,706 + ABZR87_RS03690 0.87 +1.3 769,707 - ABZR87_RS03690 0.88 +1.3 769,707 - ABZR87_RS03690 0.88 +0.5 769,707 - ABZR87_RS03690 0.88 -0.4 769,763 + +0.4 769,763 + +0.6 769,764 - -1.8 769,764 - -1.3 769,764 - -1.0 769,764 - +0.0 769,764 - -0.8 769,764 - +1.2 769,852 + +0.5 769,853 - +1.3 769,853 - -1.2 769,853 - -1.0 769,853 - -0.2 769,931 + +0.7 769,931 + +0.2 769,931 + -0.8 769,931 + +0.9 769,931 + +0.8 769,931 + +0.7 769,931 + +0.1 769,931 + +0.2 769,931 + +1.6 769,931 + +0.6 769,931 + +0.4 769,931 + +0.3 769,931 + +1.0 769,932 - +0.6 769,932 - -2.0 769,932 - +0.1 769,932 - +0.0 769,932 - -0.5 769,932 - +0.6 769,932 - -1.3 769,932 - +0.2 770,034 + ABZR87_RS03695 0.31 -0.1 770,062 - ABZR87_RS03695 0.40 +0.0 770,062 - ABZR87_RS03695 0.40 +0.8 770,062 - ABZR87_RS03695 0.40 +0.2 770,078 + ABZR87_RS03695 0.44 +0.9 770,078 + ABZR87_RS03695 0.44 +1.7 770,078 + ABZR87_RS03695 0.44 +0.3 770,078 + ABZR87_RS03695 0.44 +0.8 770,078 + ABZR87_RS03695 0.44 +0.7 770,079 - ABZR87_RS03695 0.45 +1.1 770,091 + ABZR87_RS03695 0.48 +0.6 770,092 - ABZR87_RS03695 0.49 +0.9 770,092 - ABZR87_RS03695 0.49 +0.6 770,092 - ABZR87_RS03695 0.49 +1.0 770,178 + ABZR87_RS03695 0.74 -1.6 770,249 + -1.8 770,249 + +0.1 770,250 - +0.5 770,250 - +0.8 770,284 - -0.6 770,320 - +1.6 770,399 + ABZR87_RS03700 0.21 +0.5 770,399 + ABZR87_RS03700 0.21 -0.7 770,399 + ABZR87_RS03700 0.21 -0.5 770,399 + ABZR87_RS03700 0.21 -0.5 770,400 - ABZR87_RS03700 0.21 +0.0 770,400 - ABZR87_RS03700 0.21 +0.0 770,400 - ABZR87_RS03700 0.21 -0.9 770,464 - ABZR87_RS03700 0.33 -0.5 770,464 - ABZR87_RS03700 0.33 -0.0 770,464 - ABZR87_RS03700 0.33 -2.8 770,464 - ABZR87_RS03700 0.33 +0.9 770,464 - ABZR87_RS03700 0.33 +0.5 770,464 - ABZR87_RS03700 0.33 +0.4 770,464 - ABZR87_RS03700 0.33 -0.8 770,556 + ABZR87_RS03700 0.49 -1.7 770,556 + ABZR87_RS03700 0.49 -0.3 770,556 + ABZR87_RS03700 0.49 -0.2 770,557 - ABZR87_RS03700 0.49 -0.8 770,584 + ABZR87_RS03700 0.54 -0.4 770,585 - ABZR87_RS03700 0.54 -0.2 770,621 + ABZR87_RS03700 0.61 +1.3 770,622 - ABZR87_RS03700 0.61 +0.6 770,622 - ABZR87_RS03700 0.61 -0.0 770,652 - ABZR87_RS03700 0.66 -0.3 770,671 - ABZR87_RS03700 0.70 +0.8 770,747 + ABZR87_RS03700 0.83 -2.2 770,747 + ABZR87_RS03700 0.83 -0.4 770,795 - +1.7 770,815 + -0.0 770,815 + -0.1 770,815 + -0.5 770,815 + -1.0 770,815 + +0.1 770,815 + +0.1 770,815 + -0.0 770,816 - +1.1 770,816 - +0.6 770,816 - -0.2 770,816 - +0.3 770,816 - -0.2 770,850 + +0.6 770,851 - +0.6 770,972 + ABZR87_RS03705 0.62 -1.9 770,973 - ABZR87_RS03705 0.63 -1.4 771,043 + -0.7 771,043 + -0.4 771,043 + -0.4 771,043 + -0.8 771,044 - +0.6 771,044 - +0.9 771,044 - -0.1 771,050 + +0.2 771,050 + -0.6 771,050 + +0.2 771,050 + +0.1 771,050 + -0.4 771,050 + +0.1 771,050 + +1.0 771,050 + +0.1 771,050 + +3.1 771,050 + -0.1 771,051 - +0.7 771,051 - -0.9 771,051 - +2.7 771,051 - -1.1 771,051 - -0.4 771,051 - -1.4 771,051 - +1.6 771,051 - -0.2 771,051 - -1.4 771,051 - +1.0 771,088 + -0.0 771,088 + -2.0 771,088 + +0.7 771,088 + +1.6 771,089 - -0.7 771,089 - +0.1 771,089 - -0.0 771,089 - +0.6 771,089 - +0.8 771,089 - +0.0 771,125 + -0.1 771,129 + +0.1 771,130 - +0.8 771,130 - +1.1 771,130 - +0.1 771,130 - -1.4 771,130 - -0.9 771,152 + +0.4 771,152 + -1.4 771,152 + +0.3 771,152 + +0.5 771,152 + -0.4 771,152 + +0.0 771,152 + +0.3 771,152 + -0.0 771,152 + -0.1 771,152 + +0.3 771,152 + +0.1 771,153 - +1.4 771,153 - -0.4 771,153 - -0.5 771,153 - -0.1 771,153 - -1.5 771,153 - -0.3 771,153 - -1.0 771,153 - +0.2 771,153 - +0.6 771,153 - +0.5 771,153 - -2.1 771,153 - -0.2 771,153 - +0.3 771,153 - -1.0 771,153 - -1.1 771,198 + -0.7 771,198 + -2.2 771,198 + +0.8 771,198 + +1.5 771,198 + +1.3 771,199 - -0.3 771,199 - +0.4 771,199 - -2.2 771,199 - -0.2 771,199 - -2.0 771,199 - +0.8
Or see this region's nucleotide sequence