Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17735 and ABZR87_RS17740 are separated by 22 nucleotides ABZR87_RS17740 and ABZR87_RS17745 overlap by 4 nucleotides ABZR87_RS17745 and ABZR87_RS17750 are separated by 19 nucleotides ABZR87_RS17750 and ABZR87_RS17755 are separated by 28 nucleotides
ABZR87_RS17735: ABZR87_RS17735 - ABC transporter substrate-binding protein, at 341,029 to 342,078
_RS17735
ABZR87_RS17740: ABZR87_RS17740 - ABC transporter ATP-binding protein, at 342,101 to 343,015
_RS17740
ABZR87_RS17745: ABZR87_RS17745 - ABC transporter permease, at 343,012 to 343,800
_RS17745
ABZR87_RS17750: ABZR87_RS17750 - transporter substrate-binding domain-containing protein, at 343,820 to 344,770
_RS17750
ABZR87_RS17755: ABZR87_RS17755 - methionine ABC transporter permease, at 344,799 to 345,443
_RS17755
Position (kb) 343
344 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 342.043 kb on + strand at 342.044 kb on - strand at 342.044 kb on - strand at 342.044 kb on - strand at 342.044 kb on - strand at 342.065 kb on - strand at 342.140 kb on + strand at 342.141 kb on - strand at 342.147 kb on + strand at 342.147 kb on + strand at 342.148 kb on - strand at 342.307 kb on + strand, within ABZR87_RS17740 at 342.307 kb on + strand, within ABZR87_RS17740 at 342.308 kb on - strand, within ABZR87_RS17740 at 342.371 kb on + strand, within ABZR87_RS17740 at 342.569 kb on + strand, within ABZR87_RS17740 at 342.569 kb on + strand, within ABZR87_RS17740 at 343.088 kb on + strand at 343.089 kb on - strand at 343.129 kb on + strand, within ABZR87_RS17745 at 343.129 kb on + strand, within ABZR87_RS17745 at 343.180 kb on - strand, within ABZR87_RS17745 at 343.588 kb on + strand, within ABZR87_RS17745 at 343.589 kb on - strand, within ABZR87_RS17745 at 343.589 kb on - strand, within ABZR87_RS17745 at 343.690 kb on + strand, within ABZR87_RS17745 at 343.690 kb on + strand, within ABZR87_RS17745 at 343.691 kb on - strand, within ABZR87_RS17745 at 343.691 kb on - strand, within ABZR87_RS17745 at 344.090 kb on + strand, within ABZR87_RS17750 at 344.220 kb on + strand, within ABZR87_RS17750 at 344.220 kb on + strand, within ABZR87_RS17750 at 344.221 kb on - strand, within ABZR87_RS17750 at 344.303 kb on + strand, within ABZR87_RS17750 at 344.304 kb on - strand, within ABZR87_RS17750 at 344.378 kb on - strand, within ABZR87_RS17750 at 344.378 kb on - strand, within ABZR87_RS17750 at 344.378 kb on - strand, within ABZR87_RS17750 at 344.406 kb on - strand, within ABZR87_RS17750 at 344.406 kb on - strand, within ABZR87_RS17750 at 344.406 kb on - strand, within ABZR87_RS17750 at 344.406 kb on - strand, within ABZR87_RS17750 at 344.561 kb on + strand, within ABZR87_RS17750 at 344.561 kb on + strand, within ABZR87_RS17750
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 342,043 + +1.7 342,044 - -3.0 342,044 - -3.2 342,044 - +0.4 342,044 - -0.3 342,065 - -2.3 342,140 + +0.9 342,141 - +1.0 342,147 + -3.2 342,147 + -0.0 342,148 - +2.5 342,307 + ABZR87_RS17740 0.23 +1.3 342,307 + ABZR87_RS17740 0.23 +1.2 342,308 - ABZR87_RS17740 0.23 +0.8 342,371 + ABZR87_RS17740 0.30 +2.1 342,569 + ABZR87_RS17740 0.51 +1.8 342,569 + ABZR87_RS17740 0.51 -1.3 343,088 + +0.1 343,089 - +0.8 343,129 + ABZR87_RS17745 0.15 -1.3 343,129 + ABZR87_RS17745 0.15 +0.4 343,180 - ABZR87_RS17745 0.21 -3.2 343,588 + ABZR87_RS17745 0.73 +2.3 343,589 - ABZR87_RS17745 0.73 +1.2 343,589 - ABZR87_RS17745 0.73 +2.4 343,690 + ABZR87_RS17745 0.86 +0.7 343,690 + ABZR87_RS17745 0.86 +1.3 343,691 - ABZR87_RS17745 0.86 +0.9 343,691 - ABZR87_RS17745 0.86 +4.9 344,090 + ABZR87_RS17750 0.28 -1.3 344,220 + ABZR87_RS17750 0.42 -3.0 344,220 + ABZR87_RS17750 0.42 -3.8 344,221 - ABZR87_RS17750 0.42 -0.6 344,303 + ABZR87_RS17750 0.51 +1.9 344,304 - ABZR87_RS17750 0.51 -0.2 344,378 - ABZR87_RS17750 0.59 +0.3 344,378 - ABZR87_RS17750 0.59 +0.8 344,378 - ABZR87_RS17750 0.59 -1.6 344,406 - ABZR87_RS17750 0.62 -3.6 344,406 - ABZR87_RS17750 0.62 -1.9 344,406 - ABZR87_RS17750 0.62 +1.5 344,406 - ABZR87_RS17750 0.62 -3.5 344,561 + ABZR87_RS17750 0.78 +0.2 344,561 + ABZR87_RS17750 0.78 -0.8
Or see this region's nucleotide sequence