Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17735 and ABZR87_RS17740 are separated by 22 nucleotides ABZR87_RS17740 and ABZR87_RS17745 overlap by 4 nucleotides ABZR87_RS17745 and ABZR87_RS17750 are separated by 19 nucleotides
ABZR87_RS17735: ABZR87_RS17735 - ABC transporter substrate-binding protein, at 341,029 to 342,078
_RS17735
ABZR87_RS17740: ABZR87_RS17740 - ABC transporter ATP-binding protein, at 342,101 to 343,015
_RS17740
ABZR87_RS17745: ABZR87_RS17745 - ABC transporter permease, at 343,012 to 343,800
_RS17745
ABZR87_RS17750: ABZR87_RS17750 - transporter substrate-binding domain-containing protein, at 343,820 to 344,770
_RS17750
Position (kb) 342
343
344 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 341.216 kb on - strand, within ABZR87_RS17735 at 341.216 kb on - strand, within ABZR87_RS17735 at 341.245 kb on + strand, within ABZR87_RS17735 at 341.246 kb on - strand, within ABZR87_RS17735 at 341.266 kb on + strand, within ABZR87_RS17735 at 341.296 kb on + strand, within ABZR87_RS17735 at 341.296 kb on + strand, within ABZR87_RS17735 at 341.296 kb on + strand, within ABZR87_RS17735 at 341.297 kb on - strand, within ABZR87_RS17735 at 341.297 kb on - strand, within ABZR87_RS17735 at 341.393 kb on - strand, within ABZR87_RS17735 at 341.464 kb on + strand, within ABZR87_RS17735 at 341.465 kb on - strand, within ABZR87_RS17735 at 341.465 kb on - strand, within ABZR87_RS17735 at 341.465 kb on - strand, within ABZR87_RS17735 at 341.737 kb on + strand, within ABZR87_RS17735 at 341.774 kb on - strand, within ABZR87_RS17735 at 341.938 kb on + strand, within ABZR87_RS17735 at 341.938 kb on + strand, within ABZR87_RS17735 at 341.938 kb on + strand, within ABZR87_RS17735 at 341.938 kb on + strand, within ABZR87_RS17735 at 341.939 kb on - strand, within ABZR87_RS17735 at 341.939 kb on - strand, within ABZR87_RS17735 at 341.939 kb on - strand, within ABZR87_RS17735 at 341.977 kb on + strand at 341.978 kb on - strand at 341.978 kb on - strand at 341.980 kb on + strand at 341.980 kb on + strand at 341.980 kb on + strand at 341.980 kb on + strand at 341.981 kb on - strand at 341.981 kb on - strand at 342.043 kb on + strand at 342.044 kb on - strand at 342.044 kb on - strand at 342.044 kb on - strand at 342.044 kb on - strand at 342.065 kb on - strand at 342.140 kb on + strand at 342.141 kb on - strand at 342.147 kb on + strand at 342.147 kb on + strand at 342.148 kb on - strand at 342.307 kb on + strand, within ABZR87_RS17740 at 342.307 kb on + strand, within ABZR87_RS17740 at 342.308 kb on - strand, within ABZR87_RS17740 at 342.371 kb on + strand, within ABZR87_RS17740 at 342.569 kb on + strand, within ABZR87_RS17740 at 342.569 kb on + strand, within ABZR87_RS17740 at 343.088 kb on + strand at 343.089 kb on - strand at 343.129 kb on + strand, within ABZR87_RS17745 at 343.129 kb on + strand, within ABZR87_RS17745 at 343.180 kb on - strand, within ABZR87_RS17745 at 343.588 kb on + strand, within ABZR87_RS17745 at 343.589 kb on - strand, within ABZR87_RS17745 at 343.589 kb on - strand, within ABZR87_RS17745 at 343.690 kb on + strand, within ABZR87_RS17745 at 343.690 kb on + strand, within ABZR87_RS17745 at 343.691 kb on - strand, within ABZR87_RS17745 at 343.691 kb on - strand, within ABZR87_RS17745
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 341,216 - ABZR87_RS17735 0.18 -3.4 341,216 - ABZR87_RS17735 0.18 -0.3 341,245 + ABZR87_RS17735 0.21 +1.1 341,246 - ABZR87_RS17735 0.21 +1.2 341,266 + ABZR87_RS17735 0.23 +2.4 341,296 + ABZR87_RS17735 0.25 -1.7 341,296 + ABZR87_RS17735 0.25 +0.4 341,296 + ABZR87_RS17735 0.25 -0.4 341,297 - ABZR87_RS17735 0.26 +1.5 341,297 - ABZR87_RS17735 0.26 +0.4 341,393 - ABZR87_RS17735 0.35 +0.6 341,464 + ABZR87_RS17735 0.41 +0.4 341,465 - ABZR87_RS17735 0.42 +1.6 341,465 - ABZR87_RS17735 0.42 -2.6 341,465 - ABZR87_RS17735 0.42 -0.3 341,737 + ABZR87_RS17735 0.67 -2.6 341,774 - ABZR87_RS17735 0.71 -1.9 341,938 + ABZR87_RS17735 0.87 -0.4 341,938 + ABZR87_RS17735 0.87 +0.7 341,938 + ABZR87_RS17735 0.87 -2.5 341,938 + ABZR87_RS17735 0.87 -2.1 341,939 - ABZR87_RS17735 0.87 +0.8 341,939 - ABZR87_RS17735 0.87 +2.7 341,939 - ABZR87_RS17735 0.87 -2.9 341,977 + -2.5 341,978 - +0.4 341,978 - +0.8 341,980 + -1.8 341,980 + +1.3 341,980 + +0.6 341,980 + -2.8 341,981 - +3.6 341,981 - -3.8 342,043 + +1.7 342,044 - -3.0 342,044 - -3.2 342,044 - +0.4 342,044 - -0.3 342,065 - -2.3 342,140 + +0.9 342,141 - +1.0 342,147 + -3.2 342,147 + -0.0 342,148 - +2.5 342,307 + ABZR87_RS17740 0.23 +1.3 342,307 + ABZR87_RS17740 0.23 +1.2 342,308 - ABZR87_RS17740 0.23 +0.8 342,371 + ABZR87_RS17740 0.30 +2.1 342,569 + ABZR87_RS17740 0.51 +1.8 342,569 + ABZR87_RS17740 0.51 -1.3 343,088 + +0.1 343,089 - +0.8 343,129 + ABZR87_RS17745 0.15 -1.3 343,129 + ABZR87_RS17745 0.15 +0.4 343,180 - ABZR87_RS17745 0.21 -3.2 343,588 + ABZR87_RS17745 0.73 +2.3 343,589 - ABZR87_RS17745 0.73 +1.2 343,589 - ABZR87_RS17745 0.73 +2.4 343,690 + ABZR87_RS17745 0.86 +0.7 343,690 + ABZR87_RS17745 0.86 +1.3 343,691 - ABZR87_RS17745 0.86 +0.9 343,691 - ABZR87_RS17745 0.86 +4.9
Or see this region's nucleotide sequence