Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15590

Experiment: Sebacic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sebacic (C)
3,284,892	+		ABZR87_RS15585	0.34	+1.6
3,284,892	+		ABZR87_RS15585	0.34	+1.6
3,284,893	-		ABZR87_RS15585	0.34	+2.7
3,284,893	-		ABZR87_RS15585	0.34	-1.9
3,284,893	-		ABZR87_RS15585	0.34	-0.4
3,284,973	+		ABZR87_RS15585	0.40	-2.0
3,284,973	+		ABZR87_RS15585	0.40	-4.1
3,284,974	-		ABZR87_RS15585	0.40	+2.6
3,284,974	-		ABZR87_RS15585	0.40	+2.7
3,285,090	+		ABZR87_RS15585	0.49	-1.8
3,285,091	-		ABZR87_RS15585	0.49	+2.5
3,285,180	+		ABZR87_RS15585	0.57	+2.5
3,285,180	+		ABZR87_RS15585	0.57	-2.4
3,285,180	+		ABZR87_RS15585	0.57	-1.0
3,285,238	-		ABZR87_RS15585	0.61	-1.0
3,285,240	+		ABZR87_RS15585	0.61	-2.9
3,285,241	-		ABZR87_RS15585	0.61	-3.0
3,285,241	-		ABZR87_RS15585	0.61	+0.3
3,285,377	-		ABZR87_RS15585	0.72	+1.6
3,285,455	-		ABZR87_RS15585	0.78	-2.8
3,285,466	+		ABZR87_RS15585	0.79	+1.2
3,285,519	+		ABZR87_RS15585	0.83	-1.4
3,285,519	+		ABZR87_RS15585	0.83	+3.3
3,285,519	+		ABZR87_RS15585	0.83	+1.0
3,285,520	-		ABZR87_RS15585	0.83	-2.0
3,285,520	-		ABZR87_RS15585	0.83	-0.6
3,285,520	-		ABZR87_RS15585	0.83	+1.4
3,285,520	-		ABZR87_RS15585	0.83	-2.2
3,285,532	-		ABZR87_RS15585	0.84	-1.0
3,285,532	-		ABZR87_RS15585	0.84	+0.6
3,285,606	+				-0.6
3,285,607	-				+0.8
3,285,607	-				+2.9
3,285,715	+				-1.0
3,285,715	+				-2.4
3,285,716	-				-0.2
3,285,716	-				-0.9
3,285,716	-				-1.0
3,285,716	-				+0.2
3,285,803	+				+2.2
3,285,855	+				-1.0
3,285,855	+				+2.7
3,285,855	+				+2.1
3,285,856	-				+3.1
3,285,856	-				+3.4
3,285,882	+				-0.8
3,285,882	+				-2.4
3,285,883	-				+1.8
3,286,011	+		ABZR87_RS15590	0.12	+2.7
3,286,095	+		ABZR87_RS15590	0.17	+1.0
3,286,095	+		ABZR87_RS15590	0.17	+0.8
3,286,095	+		ABZR87_RS15590	0.17	-1.2
3,286,095	+		ABZR87_RS15590	0.17	+1.2
3,286,095	+		ABZR87_RS15590	0.17	+1.2
3,286,096	-		ABZR87_RS15590	0.17	+3.1
3,286,096	-		ABZR87_RS15590	0.17	+2.4
3,286,096	-		ABZR87_RS15590	0.17	+3.2
3,286,096	-		ABZR87_RS15590	0.17	+2.8
3,286,096	-		ABZR87_RS15590	0.17	+1.9
3,286,096	-		ABZR87_RS15590	0.17	+3.1
3,286,171	-		ABZR87_RS15590	0.22	+3.5
3,286,171	-		ABZR87_RS15590	0.22	+2.8
3,286,171	-		ABZR87_RS15590	0.22	+3.6
3,286,290	+		ABZR87_RS15590	0.30	+3.1
3,286,290	+		ABZR87_RS15590	0.30	+0.5
3,286,290	+		ABZR87_RS15590	0.30	+0.1
3,286,291	-		ABZR87_RS15590	0.30	+2.9
3,286,291	-		ABZR87_RS15590	0.30	+4.8
3,286,291	-		ABZR87_RS15590	0.30	+1.8
3,286,291	-		ABZR87_RS15590	0.30	+3.5
3,286,394	-		ABZR87_RS15590	0.36	+2.6
3,286,394	-		ABZR87_RS15590	0.36	+1.8
3,286,394	-		ABZR87_RS15590	0.36	+1.2
3,286,394	-		ABZR87_RS15590	0.36	+3.0
3,286,512	+		ABZR87_RS15590	0.43	+0.6
3,286,512	+		ABZR87_RS15590	0.43	-0.4
3,286,512	+		ABZR87_RS15590	0.43	+1.8
3,286,513	-		ABZR87_RS15590	0.44	+3.7
3,286,513	-		ABZR87_RS15590	0.44	+1.1
3,286,513	-		ABZR87_RS15590	0.44	+2.7
3,286,513	-		ABZR87_RS15590	0.44	-1.2
3,286,513	-		ABZR87_RS15590	0.44	+2.8
3,286,513	-		ABZR87_RS15590	0.44	+1.8
3,286,513	-		ABZR87_RS15590	0.44	+2.8
3,286,518	+		ABZR87_RS15590	0.44	+1.0
3,286,620	+		ABZR87_RS15590	0.50	+0.9
3,286,621	-		ABZR87_RS15590	0.50	+3.0
3,286,639	+		ABZR87_RS15590	0.51	+0.9
3,286,639	+		ABZR87_RS15590	0.51	+1.6
3,286,640	-		ABZR87_RS15590	0.52	+3.0
3,286,758	+		ABZR87_RS15590	0.59	+0.6
3,286,759	-		ABZR87_RS15590	0.59	+2.6
3,286,759	-		ABZR87_RS15590	0.59	+1.6
3,286,815	+		ABZR87_RS15590	0.62	-2.0
3,286,971	+		ABZR87_RS15590	0.72	-0.4
3,286,972	-		ABZR87_RS15590	0.72	+3.4
3,286,972	-		ABZR87_RS15590	0.72	+3.6
3,287,089	+		ABZR87_RS15590	0.80	-4.3
3,287,090	-		ABZR87_RS15590	0.80	+3.0
3,287,090	-		ABZR87_RS15590	0.80	+3.2
3,287,090	-		ABZR87_RS15590	0.80	+3.4
3,287,142	+		ABZR87_RS15590	0.83	+1.9
3,287,143	-		ABZR87_RS15590	0.83	+2.4
3,287,143	-		ABZR87_RS15590	0.83	+3.1
3,287,178	+		ABZR87_RS15590	0.85	-2.8
3,287,178	+		ABZR87_RS15590	0.85	-0.2
3,287,179	-		ABZR87_RS15590	0.85	+2.5
3,287,179	-		ABZR87_RS15590	0.85	+3.8
3,287,205	+		ABZR87_RS15590	0.87	-0.8
3,287,205	+		ABZR87_RS15590	0.87	-1.9
3,287,205	+		ABZR87_RS15590	0.87	-1.5
3,287,205	+		ABZR87_RS15590	0.87	-1.8
3,287,206	-		ABZR87_RS15590	0.87	+1.9
3,287,206	-		ABZR87_RS15590	0.87	+1.1
3,287,206	-		ABZR87_RS15590	0.87	+1.4
3,287,218	-		ABZR87_RS15590	0.88	+0.6
3,287,350	+				-2.9
3,287,366	+				+0.5
3,287,366	+				+0.6
3,287,367	-				+2.5
3,287,407	+				+0.7
3,287,408	-				+2.4
3,287,408	-				+4.1
3,287,439	-				+2.9
3,287,481	+				-3.6
3,287,482	-				+3.2
3,287,598	+				+1.6
3,287,642	+				+1.3
3,287,642	+				+0.4
3,287,642	+				+1.0
3,287,642	+				-3.9
3,287,643	-				+3.3
3,287,755	+				+1.1
3,287,755	+				-2.0
3,287,756	-				+1.4
3,287,756	-				+3.0
3,287,778	+				-3.8
3,287,779	-				+1.4
3,287,783	+				-3.7
3,287,790	+				-0.2
3,287,794	+				+1.0
3,287,794	+				+1.4
3,287,794	+				-0.1
3,287,794	+				+0.4
3,287,795	-				+2.6
3,287,795	-				+1.4
3,287,798	+				+1.8
3,287,805	-				+2.3
3,287,833	-				+0.9
3,287,833	-				+0.5
3,287,840	-				-2.0
3,287,951	-				-0.4
3,287,996	+				+0.0
3,288,004	+				+1.2
3,288,019	-				-3.0
3,288,020	+				-0.7
3,288,021	-				-2.4
3,288,051	+				-0.3
3,288,051	+				+1.9
3,288,067	+				+2.1
3,288,068	-				-3.5
3,288,099	+				+1.4
3,288,099	+				-0.2
3,288,099	+				+1.8
3,288,099	+				+1.0
3,288,099	+				-1.0
3,288,099	+				+0.5
3,288,099	+				+0.7
3,288,100	-				+0.7
3,288,100	-				-0.0
3,288,100	-				-3.8
3,288,100	-				+1.3
3,288,100	-				+1.8
3,288,100	-				+1.3
3,288,273	-				-2.4