Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS15340

Experiment: Sebacic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sebacic (C)
3,227,394	+		ABZR87_RS15335	0.16	+4.3
3,227,394	+		ABZR87_RS15335	0.16	+5.4
3,227,428	+		ABZR87_RS15335	0.21	+6.3
3,227,428	+		ABZR87_RS15335	0.21	+4.8
3,227,429	-		ABZR87_RS15335	0.21	+4.7
3,227,533	+		ABZR87_RS15335	0.37	+4.7
3,227,533	+		ABZR87_RS15335	0.37	+3.3
3,227,533	+		ABZR87_RS15335	0.37	+5.5
3,227,533	+		ABZR87_RS15335	0.37	+5.5
3,227,534	-		ABZR87_RS15335	0.37	+4.6
3,227,534	-		ABZR87_RS15335	0.37	+3.4
3,227,534	-		ABZR87_RS15335	0.37	+5.2
3,227,534	-		ABZR87_RS15335	0.37	+4.4
3,227,564	-		ABZR87_RS15335	0.42	+4.8
3,227,572	+		ABZR87_RS15335	0.43	+5.6
3,227,572	+		ABZR87_RS15335	0.43	+4.3
3,227,572	+		ABZR87_RS15335	0.43	+5.0
3,227,573	-		ABZR87_RS15335	0.43	+5.0
3,227,573	-		ABZR87_RS15335	0.43	+5.2
3,227,573	-		ABZR87_RS15335	0.43	+4.2
3,227,942	+				+5.2
3,227,943	-				+4.8
3,228,022	+				+5.5
3,228,022	+				+5.2
3,228,023	-				+3.4
3,228,042	+				+4.8
3,228,042	+				+4.7
3,228,044	+				+4.5
3,228,044	+				+4.3
3,228,045	-				+2.3
3,228,045	-				+4.4
3,228,052	-				+4.0
3,228,058	+				+4.7
3,228,058	+				+5.5
3,228,058	+				+4.9
3,228,059	-				+2.3
3,228,109	+				+4.7
3,228,109	+				+4.6
3,228,109	+				+5.6
3,228,109	+				+2.7
3,228,110	-				-2.2
3,228,110	-				+0.1
3,228,110	-				+0.1
3,228,110	-				-1.8
3,228,110	-				-1.1
3,228,110	-				-0.6
3,228,110	-				+0.5
3,228,143	+				-0.5
3,228,157	-				+0.2
3,228,178	+				+3.3
3,228,178	+				+4.0
3,228,192	+				+3.5
3,228,193	-				+4.4
3,228,193	-				-0.3
3,228,459	+		ABZR87_RS15340	0.20	-0.4
3,228,496	+		ABZR87_RS15340	0.23	+1.4
3,228,582	+		ABZR87_RS15340	0.30	+0.7
3,228,582	+		ABZR87_RS15340	0.30	+0.9
3,228,582	+		ABZR87_RS15340	0.30	+0.5
3,228,582	+		ABZR87_RS15340	0.30	+1.7
3,228,583	-		ABZR87_RS15340	0.30	+0.1
3,228,583	-		ABZR87_RS15340	0.30	+0.0
3,228,657	+		ABZR87_RS15340	0.36	-2.3
3,228,657	+		ABZR87_RS15340	0.36	+0.8
3,228,714	+		ABZR87_RS15340	0.41	+2.7
3,228,714	+		ABZR87_RS15340	0.41	-0.1
3,228,715	-		ABZR87_RS15340	0.41	-3.3
3,228,715	-		ABZR87_RS15340	0.41	-0.2
3,228,715	-		ABZR87_RS15340	0.41	-1.1
3,228,754	+		ABZR87_RS15340	0.44	+0.6
3,228,754	+		ABZR87_RS15340	0.44	-2.6
3,228,754	+		ABZR87_RS15340	0.44	+1.2
3,228,756	+		ABZR87_RS15340	0.45	-1.8
3,228,756	+		ABZR87_RS15340	0.45	+2.3
3,228,756	+		ABZR87_RS15340	0.45	+0.4
3,228,756	+		ABZR87_RS15340	0.45	+1.0
3,228,756	+		ABZR87_RS15340	0.45	-1.5
3,228,756	+		ABZR87_RS15340	0.45	+2.1
3,228,757	-		ABZR87_RS15340	0.45	-0.2
3,228,757	-		ABZR87_RS15340	0.45	-2.1
3,228,757	-		ABZR87_RS15340	0.45	-1.9
3,228,757	-		ABZR87_RS15340	0.45	-0.8
3,228,757	-		ABZR87_RS15340	0.45	-3.4
3,228,757	-		ABZR87_RS15340	0.45	-0.5
3,228,757	-		ABZR87_RS15340	0.45	+0.6
3,228,757	-		ABZR87_RS15340	0.45	-3.5
3,228,757	-		ABZR87_RS15340	0.45	-1.7
3,228,766	-		ABZR87_RS15340	0.45	+1.2
3,228,792	+		ABZR87_RS15340	0.47	-2.3
3,228,861	+		ABZR87_RS15340	0.53	-0.2
3,228,861	+		ABZR87_RS15340	0.53	-0.1
3,228,861	+		ABZR87_RS15340	0.53	+1.5
3,228,862	-		ABZR87_RS15340	0.53	+0.3
3,228,862	-		ABZR87_RS15340	0.53	-2.5
3,229,002	+		ABZR87_RS15340	0.65	-2.9
3,229,002	+		ABZR87_RS15340	0.65	+1.3
3,229,155	+		ABZR87_RS15340	0.77	+2.4
3,229,156	-		ABZR87_RS15340	0.77	+0.9
3,229,156	-		ABZR87_RS15340	0.77	-1.1
3,229,156	-		ABZR87_RS15340	0.77	-2.6
3,229,173	+		ABZR87_RS15340	0.79	+1.8
3,229,173	+		ABZR87_RS15340	0.79	-0.4
3,229,173	+		ABZR87_RS15340	0.79	-0.3
3,229,174	-		ABZR87_RS15340	0.79	-0.0
3,229,174	-		ABZR87_RS15340	0.79	-1.8
3,229,174	-		ABZR87_RS15340	0.79	-2.1
3,229,174	-		ABZR87_RS15340	0.79	+1.5
3,229,215	+		ABZR87_RS15340	0.82	+0.5
3,229,216	-		ABZR87_RS15340	0.82	+1.0
3,229,285	+		ABZR87_RS15340	0.88	+0.5
3,229,285	+		ABZR87_RS15340	0.88	-0.6
3,229,285	+		ABZR87_RS15340	0.88	+1.4
3,229,285	+		ABZR87_RS15340	0.88	+0.3
3,229,285	+		ABZR87_RS15340	0.88	+0.2
3,229,286	-		ABZR87_RS15340	0.88	-4.4
3,229,286	-		ABZR87_RS15340	0.88	-3.3
3,229,286	-		ABZR87_RS15340	0.88	-2.8
3,229,286	-		ABZR87_RS15340	0.88	+2.2
3,229,323	+				-0.2
3,229,323	+				+1.5
3,229,323	+				+0.9
3,229,324	-				-0.7
3,229,324	-				-0.8
3,229,324	-				-2.5
3,229,324	-				+0.2
3,229,324	-				+0.8
3,229,324	-				-0.5
3,229,488	-				+0.0
3,229,576	-				+1.2
3,229,576	-				+0.1
3,229,652	+				-1.3
3,229,652	+				+1.6
3,229,705	+				+1.5
3,229,707	+				+0.8
3,229,708	-				-1.5
3,229,834	+				+1.4
3,229,835	-				-1.5
3,229,924	+				-1.5
3,230,289	+		ABZR87_RS15345	0.25	-0.0
3,230,289	+		ABZR87_RS15345	0.25	-0.7
3,230,289	+		ABZR87_RS15345	0.25	+2.0
3,230,289	+		ABZR87_RS15345	0.25	-2.3
3,230,289	+		ABZR87_RS15345	0.25	+0.0
3,230,289	+		ABZR87_RS15345	0.25	+0.7
3,230,290	-		ABZR87_RS15345	0.25	-2.3
3,230,290	-		ABZR87_RS15345	0.25	+0.2
3,230,290	-		ABZR87_RS15345	0.25	-3.6
3,230,290	-		ABZR87_RS15345	0.25	-2.5
3,230,290	-		ABZR87_RS15345	0.25	+1.0
3,230,290	-		ABZR87_RS15345	0.25	+0.4
3,230,290	-		ABZR87_RS15345	0.25	-0.2
3,230,290	-		ABZR87_RS15345	0.25	-1.5