Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS13035 and ABZR87_RS13040 are separated by 29 nucleotides ABZR87_RS13040 and ABZR87_RS13045 are separated by 54 nucleotides ABZR87_RS13045 and ABZR87_RS13050 overlap by 4 nucleotides ABZR87_RS13050 and ABZR87_RS13055 overlap by 4 nucleotides
ABZR87_RS13035: ABZR87_RS13035 - phage tail sheath protein, at 2,767,719 to 2,768,894
_RS13035
ABZR87_RS13040: ABZR87_RS13040 - phage major tail tube protein, at 2,768,924 to 2,769,433
_RS13040
ABZR87_RS13045: ABZR87_RS13045 - phage tail assembly protein, at 2,769,488 to 2,769,814
_RS13045
ABZR87_RS13050: ABZR87_RS13050 - GpE family phage tail protein, at 2,769,811 to 2,769,912
_RS13050
ABZR87_RS13055: ABZR87_RS13055 - hypothetical protein, at 2,769,909 to 2,772,548
_RS13055
Position (kb)
2769
2770 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2768.857 kb on - strand at 2768.912 kb on + strand at 2769.035 kb on + strand, within ABZR87_RS13040 at 2769.107 kb on + strand, within ABZR87_RS13040 at 2769.107 kb on + strand, within ABZR87_RS13040 at 2769.107 kb on + strand, within ABZR87_RS13040 at 2769.107 kb on + strand, within ABZR87_RS13040 at 2769.107 kb on + strand, within ABZR87_RS13040 at 2769.108 kb on - strand, within ABZR87_RS13040 at 2769.108 kb on - strand, within ABZR87_RS13040 at 2769.108 kb on - strand, within ABZR87_RS13040 at 2769.108 kb on - strand, within ABZR87_RS13040 at 2769.108 kb on - strand, within ABZR87_RS13040 at 2769.189 kb on - strand, within ABZR87_RS13040 at 2769.318 kb on - strand, within ABZR87_RS13040 at 2769.320 kb on + strand, within ABZR87_RS13040 at 2769.320 kb on + strand, within ABZR87_RS13040 at 2769.321 kb on - strand, within ABZR87_RS13040 at 2769.321 kb on - strand, within ABZR87_RS13040 at 2769.442 kb on + strand at 2769.588 kb on + strand, within ABZR87_RS13045 at 2769.589 kb on - strand, within ABZR87_RS13045 at 2769.589 kb on - strand, within ABZR87_RS13045 at 2769.589 kb on - strand, within ABZR87_RS13045 at 2769.640 kb on + strand, within ABZR87_RS13045 at 2769.640 kb on + strand, within ABZR87_RS13045 at 2769.640 kb on + strand, within ABZR87_RS13045 at 2769.641 kb on - strand, within ABZR87_RS13045 at 2769.841 kb on + strand, within ABZR87_RS13050 at 2770.339 kb on + strand, within ABZR87_RS13055 at 2770.340 kb on - strand, within ABZR87_RS13055 at 2770.503 kb on - strand, within ABZR87_RS13055 at 2770.647 kb on + strand, within ABZR87_RS13055 at 2770.647 kb on + strand, within ABZR87_RS13055
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 2,768,857 - +0.4 2,768,912 + -0.1 2,769,035 + ABZR87_RS13040 0.22 +0.8 2,769,107 + ABZR87_RS13040 0.36 +0.1 2,769,107 + ABZR87_RS13040 0.36 -0.3 2,769,107 + ABZR87_RS13040 0.36 +0.9 2,769,107 + ABZR87_RS13040 0.36 +1.0 2,769,107 + ABZR87_RS13040 0.36 -3.4 2,769,108 - ABZR87_RS13040 0.36 -2.8 2,769,108 - ABZR87_RS13040 0.36 +2.0 2,769,108 - ABZR87_RS13040 0.36 -3.1 2,769,108 - ABZR87_RS13040 0.36 +2.5 2,769,108 - ABZR87_RS13040 0.36 +0.8 2,769,189 - ABZR87_RS13040 0.52 +0.9 2,769,318 - ABZR87_RS13040 0.77 +1.8 2,769,320 + ABZR87_RS13040 0.78 -1.2 2,769,320 + ABZR87_RS13040 0.78 +2.3 2,769,321 - ABZR87_RS13040 0.78 -0.0 2,769,321 - ABZR87_RS13040 0.78 +0.5 2,769,442 + -0.6 2,769,588 + ABZR87_RS13045 0.31 -2.0 2,769,589 - ABZR87_RS13045 0.31 +0.8 2,769,589 - ABZR87_RS13045 0.31 +0.7 2,769,589 - ABZR87_RS13045 0.31 -3.3 2,769,640 + ABZR87_RS13045 0.46 -3.4 2,769,640 + ABZR87_RS13045 0.46 +2.3 2,769,640 + ABZR87_RS13045 0.46 -0.6 2,769,641 - ABZR87_RS13045 0.47 -2.6 2,769,841 + ABZR87_RS13050 0.29 -1.9 2,770,339 + ABZR87_RS13055 0.16 -2.8 2,770,340 - ABZR87_RS13055 0.16 +1.3 2,770,503 - ABZR87_RS13055 0.23 +2.6 2,770,647 + ABZR87_RS13055 0.28 -0.2 2,770,647 + ABZR87_RS13055 0.28 -1.9
Or see this region's nucleotide sequence