Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11645 and ABZR87_RS11650 overlap by 4 nucleotides ABZR87_RS11650 and ABZR87_RS11655 overlap by 4 nucleotides ABZR87_RS11655 and ABZR87_RS11660 are separated by 31 nucleotides
ABZR87_RS11645: ABZR87_RS11645 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 2,467,904 to 2,468,641
_RS11645
ABZR87_RS11650: ABZR87_RS11650 - ribosomal protein S18-alanine N-acetyltransferase, at 2,468,638 to 2,469,165
_RS11650
ABZR87_RS11655: ABZR87_RS11655 - uracil-DNA glycosylase, at 2,469,162 to 2,469,968
_RS11655
ABZR87_RS11660: ABZR87_RS11660 - lysophospholipid transporter LplT, at 2,470,000 to 2,471,316
_RS11660
Position (kb)
2469
2470 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2469.040 kb on + strand, within ABZR87_RS11650 at 2469.040 kb on + strand, within ABZR87_RS11650 at 2469.040 kb on + strand, within ABZR87_RS11650 at 2469.040 kb on + strand, within ABZR87_RS11650 at 2469.041 kb on - strand, within ABZR87_RS11650 at 2469.082 kb on + strand, within ABZR87_RS11650 at 2469.082 kb on + strand, within ABZR87_RS11650 at 2469.085 kb on + strand, within ABZR87_RS11650 at 2469.868 kb on - strand, within ABZR87_RS11655 at 2469.966 kb on + strand at 2470.391 kb on + strand, within ABZR87_RS11660
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 2,469,040 + ABZR87_RS11650 0.76 -1.6 2,469,040 + ABZR87_RS11650 0.76 +0.9 2,469,040 + ABZR87_RS11650 0.76 -2.7 2,469,040 + ABZR87_RS11650 0.76 -1.0 2,469,041 - ABZR87_RS11650 0.76 -1.1 2,469,082 + ABZR87_RS11650 0.84 -3.8 2,469,082 + ABZR87_RS11650 0.84 -3.6 2,469,085 + ABZR87_RS11650 0.85 +0.9 2,469,868 - ABZR87_RS11655 0.87 +0.4 2,469,966 + +1.6 2,470,391 + ABZR87_RS11660 0.30 -0.6
Or see this region's nucleotide sequence