Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05545

Experiment: Sebacic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sebacic (C)
1,178,856	+		ABZR87_RS05540	0.60	+0.2
1,178,857	-		ABZR87_RS05540	0.60	+2.1
1,178,857	-		ABZR87_RS05540	0.60	-2.6
1,178,980	-		ABZR87_RS05540	0.66	-3.2
1,178,980	-		ABZR87_RS05540	0.66	+0.6
1,179,099	+		ABZR87_RS05540	0.72	-1.3
1,179,167	+		ABZR87_RS05540	0.76	-0.4
1,179,167	+		ABZR87_RS05540	0.76	-2.2
1,179,168	-		ABZR87_RS05540	0.76	+0.4
1,179,168	-		ABZR87_RS05540	0.76	+1.2
1,179,168	-		ABZR87_RS05540	0.76	+1.6
1,179,249	+		ABZR87_RS05540	0.80	-5.3
1,179,249	+		ABZR87_RS05540	0.80	+1.8
1,179,249	+		ABZR87_RS05540	0.80	+0.9
1,179,249	+		ABZR87_RS05540	0.80	-0.3
1,179,250	-		ABZR87_RS05540	0.80	-2.1
1,179,250	-		ABZR87_RS05540	0.80	-1.6
1,179,250	-		ABZR87_RS05540	0.80	-0.4
1,179,250	-		ABZR87_RS05540	0.80	+0.7
1,179,250	-		ABZR87_RS05540	0.80	+3.1
1,179,324	+		ABZR87_RS05540	0.84	+0.7
1,179,324	+		ABZR87_RS05540	0.84	+1.7
1,179,324	+		ABZR87_RS05540	0.84	-0.3
1,179,324	+		ABZR87_RS05540	0.84	+1.4
1,179,324	+		ABZR87_RS05540	0.84	-0.8
1,179,324	+		ABZR87_RS05540	0.84	+2.1
1,179,324	+		ABZR87_RS05540	0.84	-1.9
1,179,324	+		ABZR87_RS05540	0.84	-2.2
1,179,324	+		ABZR87_RS05540	0.84	+1.7
1,179,325	-		ABZR87_RS05540	0.84	+0.1
1,179,325	-		ABZR87_RS05540	0.84	+0.0
1,179,325	-		ABZR87_RS05540	0.84	+0.4
1,179,325	-		ABZR87_RS05540	0.84	-0.2
1,179,325	-		ABZR87_RS05540	0.84	-1.4
1,179,325	-		ABZR87_RS05540	0.84	+0.5
1,179,325	-		ABZR87_RS05540	0.84	+1.4
1,179,508	-				+1.1
1,179,541	+				+1.0
1,179,541	+				-1.0
1,179,541	+				-2.5
1,179,541	+				-2.5
1,179,541	+				+1.6
1,179,542	-				-4.1
1,179,542	-				-2.0
1,179,542	-				-3.9
1,179,542	-				-0.3
1,179,542	-				-0.8
1,179,609	+				+1.8
1,179,715	+				+0.8
1,179,715	+				-1.2
1,179,715	+				+0.1
1,179,787	+		ABZR87_RS05545	0.15	+1.9
1,179,787	+		ABZR87_RS05545	0.15	+0.7
1,179,788	-		ABZR87_RS05545	0.15	+0.4
1,179,788	-		ABZR87_RS05545	0.15	-1.9
1,179,788	-		ABZR87_RS05545	0.15	+2.8
1,179,788	-		ABZR87_RS05545	0.15	-1.6
1,179,788	-		ABZR87_RS05545	0.15	-1.3
1,179,793	+		ABZR87_RS05545	0.16	+1.4
1,179,793	+		ABZR87_RS05545	0.16	-3.5
1,179,793	+		ABZR87_RS05545	0.16	+0.0
1,179,793	+		ABZR87_RS05545	0.16	-0.7
1,179,793	+		ABZR87_RS05545	0.16	+0.6
1,179,794	-		ABZR87_RS05545	0.16	+2.5
1,179,794	-		ABZR87_RS05545	0.16	+0.9
1,179,794	-		ABZR87_RS05545	0.16	-4.3
1,179,794	-		ABZR87_RS05545	0.16	-2.0
1,179,794	-		ABZR87_RS05545	0.16	-0.2
1,179,847	+		ABZR87_RS05545	0.22	+2.6
1,179,848	-		ABZR87_RS05545	0.22	-1.2
1,179,848	-		ABZR87_RS05545	0.22	+0.1
1,179,848	-		ABZR87_RS05545	0.22	+0.5
1,179,967	+		ABZR87_RS05545	0.37	+1.3
1,179,968	-		ABZR87_RS05545	0.37	-1.6
1,179,968	-		ABZR87_RS05545	0.37	+1.2
1,179,979	+		ABZR87_RS05545	0.38	+2.0
1,179,979	+		ABZR87_RS05545	0.38	-0.2
1,179,979	+		ABZR87_RS05545	0.38	-3.3
1,179,979	+		ABZR87_RS05545	0.38	-1.5
1,179,980	-		ABZR87_RS05545	0.38	-1.8
1,179,980	-		ABZR87_RS05545	0.38	+1.3
1,179,980	-		ABZR87_RS05545	0.38	+0.7
1,179,980	-		ABZR87_RS05545	0.38	+0.9
1,179,980	-		ABZR87_RS05545	0.38	+1.2
1,180,176	+		ABZR87_RS05545	0.61	-1.7
1,180,176	+		ABZR87_RS05545	0.61	-2.0
1,180,177	-		ABZR87_RS05545	0.62	-0.5
1,180,177	-		ABZR87_RS05545	0.62	+0.6
1,180,177	-		ABZR87_RS05545	0.62	-3.2
1,180,325	-		ABZR87_RS05545	0.79	+0.8
1,180,369	+		ABZR87_RS05545	0.84	+1.7
1,180,369	+		ABZR87_RS05545	0.84	-2.8
1,180,369	+		ABZR87_RS05545	0.84	-3.4
1,180,369	+		ABZR87_RS05545	0.84	-1.2
1,180,369	+		ABZR87_RS05545	0.84	-4.2
1,180,370	-		ABZR87_RS05545	0.85	+1.8
1,180,370	-		ABZR87_RS05545	0.85	-3.6
1,180,370	-		ABZR87_RS05545	0.85	-2.9
1,180,370	-		ABZR87_RS05545	0.85	+1.8
1,180,370	-		ABZR87_RS05545	0.85	+1.8
1,180,420	+				-0.4
1,180,421	-				+0.4
1,180,520	-				+0.5
1,180,565	-				+1.2
1,180,565	-				+2.4
1,180,675	-				+0.8
1,180,697	+				-1.8
1,180,698	-				-0.1
1,180,802	+				-0.8
1,180,802	+				-0.9
1,180,802	+				-3.8
1,180,802	+				-2.3
1,180,802	+				+0.6
1,180,802	+				-2.5
1,180,803	-				-0.2
1,180,803	-				+0.4
1,180,803	-				+1.2
1,180,820	+				-3.6
1,180,821	-				+2.2
1,180,821	-				-0.5
1,180,821	-				-1.6
1,180,821	-				-2.5
1,180,821	-				+0.7
1,180,978	+		ABZR87_RS05550	0.38	-1.6
1,180,978	+		ABZR87_RS05550	0.38	-4.7
1,180,978	+		ABZR87_RS05550	0.38	+0.8
1,181,105	-		ABZR87_RS05550	0.63	+3.1
1,181,117	+		ABZR87_RS05550	0.65	-3.2
1,181,117	+		ABZR87_RS05550	0.65	+0.7
1,181,132	+		ABZR87_RS05550	0.68	-0.4
1,181,132	+		ABZR87_RS05550	0.68	-0.3
1,181,133	-		ABZR87_RS05550	0.68	-2.3
1,181,180	+		ABZR87_RS05550	0.77	+0.3
1,181,180	+		ABZR87_RS05550	0.77	-1.2
1,181,180	+		ABZR87_RS05550	0.77	+2.1
1,181,180	+		ABZR87_RS05550	0.77	+1.4
1,181,181	-		ABZR87_RS05550	0.77	+1.7
1,181,202	+		ABZR87_RS05550	0.81	-1.5
1,181,207	+		ABZR87_RS05550	0.82	+0.3
1,181,444	+				-0.1
1,181,444	+				-0.2
1,181,444	+				-0.1
1,181,444	+				+1.6
1,181,444	+				-0.1
1,181,444	+				-2.6
1,181,444	+				+1.5
1,181,444	+				-3.6
1,181,444	+				-0.2
1,181,445	-				+0.5
1,181,445	-				+3.8
1,181,445	-				-1.5
1,181,445	-				+1.2
1,181,445	-				-0.0
1,181,445	-				-1.6
1,181,445	-				-3.4
1,181,491	-				+2.0