Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05200

Experiment: Sebacic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sebacic (C)
1,092,024	+		ABZR87_RS05195	0.59	+1.6
1,092,025	-		ABZR87_RS05195	0.59	+0.2
1,092,025	-		ABZR87_RS05195	0.59	-1.5
1,092,025	-		ABZR87_RS05195	0.59	-0.9
1,092,066	+		ABZR87_RS05195	0.62	+1.5
1,092,066	+		ABZR87_RS05195	0.62	-1.7
1,092,066	+		ABZR87_RS05195	0.62	+2.0
1,092,066	+		ABZR87_RS05195	0.62	-2.8
1,092,067	-		ABZR87_RS05195	0.62	-0.1
1,092,067	-		ABZR87_RS05195	0.62	+0.1
1,092,067	-		ABZR87_RS05195	0.62	+2.5
1,092,067	-		ABZR87_RS05195	0.62	+1.6
1,092,084	+		ABZR87_RS05195	0.63	-3.4
1,092,084	+		ABZR87_RS05195	0.63	-0.8
1,092,085	-		ABZR87_RS05195	0.63	+0.1
1,092,085	-		ABZR87_RS05195	0.63	-1.7
1,092,085	-		ABZR87_RS05195	0.63	+1.4
1,092,085	-		ABZR87_RS05195	0.63	-0.2
1,092,085	-		ABZR87_RS05195	0.63	+2.0
1,092,085	-		ABZR87_RS05195	0.63	+0.7
1,092,438	+		ABZR87_RS05195	0.86	-1.8
1,092,438	+		ABZR87_RS05195	0.86	-0.5
1,092,444	+		ABZR87_RS05195	0.87	+0.9
1,092,445	-		ABZR87_RS05195	0.87	-1.9
1,092,445	-		ABZR87_RS05195	0.87	-2.7
1,092,513	-				+0.2
1,092,513	-				+0.7
1,092,588	+				-1.5
1,092,588	+				+0.9
1,092,589	-				-3.6
1,092,603	+				-3.9
1,092,603	+				-0.1
1,092,603	+				+0.3
1,092,603	+				+2.0
1,092,604	-				-1.9
1,092,604	-				-2.1
1,092,604	-				+0.3
1,092,618	+				-0.7
1,092,618	+				+1.7
1,092,618	+				-2.4
1,092,618	+				-2.6
1,092,618	+				+1.7
1,092,618	+				-1.1
1,092,618	+				+0.9
1,092,619	-				+0.6
1,092,619	-				-0.6
1,092,619	-				+1.3
1,092,619	-				+0.1
1,092,619	-				+1.6
1,092,619	-				-2.7
1,092,619	-				+0.7
1,092,619	-				-3.6
1,092,619	-				-2.9
1,092,648	+				-1.2
1,092,648	+				+0.6
1,092,648	+				-2.6
1,092,648	+				+3.0
1,092,648	+				-2.7
1,092,649	-				+0.9
1,092,649	-				+0.6
1,092,649	-				-2.9
1,092,649	-				+1.1
1,092,649	-				+1.1
1,092,649	-				-0.2
1,092,649	-				-4.2
1,092,649	-				-1.8
1,092,704	+				+1.2
1,092,704	+				+1.6
1,092,705	-				-1.4
1,092,705	-				+0.8
1,092,706	+				-0.1
1,092,706	+				-1.9
1,092,707	-				-4.4
1,092,707	-				-3.7
1,092,766	+				-3.4
1,092,766	+				+2.6
1,092,767	-				-5.2
1,092,767	-				-3.7
1,092,795	+				-1.0
1,092,795	+				+0.1
1,092,796	-				-2.5
1,092,796	-				-3.5
1,092,977	-				-4.0
1,092,977	-				-3.6
1,092,977	-				-5.0
1,093,072	+		ABZR87_RS05200	0.13	-4.3
1,093,073	-		ABZR87_RS05200	0.13	-4.1
1,093,095	-		ABZR87_RS05200	0.14	-2.8
1,093,153	+		ABZR87_RS05200	0.19	-5.2
1,093,153	+		ABZR87_RS05200	0.19	+0.9
1,093,153	+		ABZR87_RS05200	0.19	-4.0
1,093,153	+		ABZR87_RS05200	0.19	-3.7
1,093,153	+		ABZR87_RS05200	0.19	-2.7
1,093,153	+		ABZR87_RS05200	0.19	-4.1
1,093,153	+		ABZR87_RS05200	0.19	-3.2
1,093,153	+		ABZR87_RS05200	0.19	-3.3
1,093,153	+		ABZR87_RS05200	0.19	-3.0
1,093,154	-		ABZR87_RS05200	0.19	-1.5
1,093,154	-		ABZR87_RS05200	0.19	-3.2
1,093,154	-		ABZR87_RS05200	0.19	-3.2
1,093,154	-		ABZR87_RS05200	0.19	-3.1
1,093,154	-		ABZR87_RS05200	0.19	-2.9
1,093,154	-		ABZR87_RS05200	0.19	-3.1
1,093,154	-		ABZR87_RS05200	0.19	-4.3
1,093,154	-		ABZR87_RS05200	0.19	-1.7
1,093,349	+		ABZR87_RS05200	0.35	-4.3
1,093,349	+		ABZR87_RS05200	0.35	-4.4
1,093,349	+		ABZR87_RS05200	0.35	-3.3
1,093,349	+		ABZR87_RS05200	0.35	-4.7
1,093,493	+		ABZR87_RS05200	0.47	-1.1
1,093,493	+		ABZR87_RS05200	0.47	-3.4
1,093,494	-		ABZR87_RS05200	0.47	-2.8
1,093,532	-		ABZR87_RS05200	0.50	-4.5
1,093,532	-		ABZR87_RS05200	0.50	-3.5
1,093,532	-		ABZR87_RS05200	0.50	-1.5
1,093,619	+		ABZR87_RS05200	0.58	-5.0
1,093,619	+		ABZR87_RS05200	0.58	-4.4
1,093,619	+		ABZR87_RS05200	0.58	-3.0
1,093,619	+		ABZR87_RS05200	0.58	-3.2
1,093,619	+		ABZR87_RS05200	0.58	-1.1
1,093,620	-		ABZR87_RS05200	0.58	-3.1
1,093,620	-		ABZR87_RS05200	0.58	-1.1
1,093,622	+		ABZR87_RS05200	0.58	-4.7
1,093,622	+		ABZR87_RS05200	0.58	-3.1
1,093,622	+		ABZR87_RS05200	0.58	-3.1
1,093,685	+		ABZR87_RS05200	0.63	-6.0
1,093,685	+		ABZR87_RS05200	0.63	-3.4
1,093,685	+		ABZR87_RS05200	0.63	-3.2
1,093,685	+		ABZR87_RS05200	0.63	-2.5
1,093,686	-		ABZR87_RS05200	0.63	-0.7
1,093,686	-		ABZR87_RS05200	0.63	-2.0
1,093,686	-		ABZR87_RS05200	0.63	-1.1
1,093,686	-		ABZR87_RS05200	0.63	-1.9
1,093,781	+		ABZR87_RS05200	0.71	-1.9
1,093,781	+		ABZR87_RS05200	0.71	-3.8
1,093,781	+		ABZR87_RS05200	0.71	-2.8
1,093,781	+		ABZR87_RS05200	0.71	-2.5
1,093,781	+		ABZR87_RS05200	0.71	-3.1
1,093,781	+		ABZR87_RS05200	0.71	-4.2
1,093,781	+		ABZR87_RS05200	0.71	-0.7
1,093,781	+		ABZR87_RS05200	0.71	-1.5
1,093,782	-		ABZR87_RS05200	0.71	-5.9
1,093,782	-		ABZR87_RS05200	0.71	-1.1
1,093,782	-		ABZR87_RS05200	0.71	-3.8
1,093,790	+		ABZR87_RS05200	0.72	-2.1
1,093,814	+		ABZR87_RS05200	0.74	-3.2
1,093,814	+		ABZR87_RS05200	0.74	-5.0
1,093,814	+		ABZR87_RS05200	0.74	-3.8
1,093,832	+		ABZR87_RS05200	0.75	-2.9
1,093,832	+		ABZR87_RS05200	0.75	-3.7
1,093,832	+		ABZR87_RS05200	0.75	-3.6
1,093,832	+		ABZR87_RS05200	0.75	-3.7
1,093,832	+		ABZR87_RS05200	0.75	-4.0
1,093,832	+		ABZR87_RS05200	0.75	-0.7
1,093,832	+		ABZR87_RS05200	0.75	-3.2
1,093,833	-		ABZR87_RS05200	0.75	-1.5
1,093,833	-		ABZR87_RS05200	0.75	-3.7
1,093,833	-		ABZR87_RS05200	0.75	-1.5
1,093,859	+		ABZR87_RS05200	0.77	-5.1
1,093,859	+		ABZR87_RS05200	0.77	-3.4
1,093,859	+		ABZR87_RS05200	0.77	-4.6
1,093,925	+		ABZR87_RS05200	0.83	-3.7
1,093,925	+		ABZR87_RS05200	0.83	-2.4
1,093,926	-		ABZR87_RS05200	0.83	-2.8
1,093,926	-		ABZR87_RS05200	0.83	-3.8
1,094,022	-				-3.1
1,094,079	-				-5.7
1,094,099	+				-4.4
1,094,100	-				-0.7
1,094,102	+				-3.1
1,094,102	+				-3.2
1,094,102	+				-3.5
1,094,102	+				-3.8
1,094,103	-				-2.9
1,094,308	+		ABZR87_RS05205	0.28	-2.7
1,094,308	+		ABZR87_RS05205	0.28	-1.1
1,094,531	-		ABZR87_RS05205	0.63	-0.1
1,094,590	+		ABZR87_RS05205	0.72	-2.6
1,094,590	+		ABZR87_RS05205	0.72	-0.0
1,094,591	-		ABZR87_RS05205	0.72	-1.9
1,094,599	+		ABZR87_RS05205	0.74	-1.1
1,094,600	-		ABZR87_RS05205	0.74	-3.0
1,094,600	-		ABZR87_RS05205	0.74	-2.6
1,094,600	-		ABZR87_RS05205	0.74	-0.0
1,094,600	-		ABZR87_RS05205	0.74	+0.8
1,094,600	-		ABZR87_RS05205	0.74	-0.2
1,094,836	+				-2.7
1,094,837	-				+1.9
1,095,022	+		ABZR87_RS05210	0.20	-0.0
1,095,103	+		ABZR87_RS05210	0.31	-0.6
1,095,103	+		ABZR87_RS05210	0.31	-1.0
1,095,104	-		ABZR87_RS05210	0.31	-0.3