Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS04530 and ABZR87_RS04535 are separated by 942 nucleotides ABZR87_RS04535 and ABZR87_RS04540 are separated by 242 nucleotides ABZR87_RS04540 and ABZR87_RS04545 are separated by 9 nucleotides
ABZR87_RS04530: ABZR87_RS04530 - MetQ/NlpA family lipoprotein, at 947,484 to 948,290
_RS04530
ABZR87_RS04535: ABZR87_RS04535 - EAL domain-containing protein, at 949,233 to 950,447
_RS04535
ABZR87_RS04540: ABZR87_RS04540 - response regulator transcription factor, at 950,690 to 951,337
_RS04540
ABZR87_RS04545: ABZR87_RS04545 - aquaporin, at 951,347 to 952,126
_RS04545
Position (kb) 949
950
951 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 948.288 kb on + strand at 948.289 kb on - strand at 948.301 kb on + strand at 948.301 kb on + strand at 948.302 kb on - strand at 948.313 kb on + strand at 948.313 kb on + strand at 948.314 kb on - strand at 948.314 kb on - strand at 948.459 kb on - strand at 948.459 kb on - strand at 948.459 kb on - strand at 948.459 kb on - strand at 948.474 kb on + strand at 948.474 kb on + strand at 948.474 kb on + strand at 948.475 kb on - strand at 948.475 kb on - strand at 948.478 kb on + strand at 948.478 kb on + strand at 948.478 kb on + strand at 948.478 kb on + strand at 948.479 kb on - strand at 948.479 kb on - strand at 948.479 kb on - strand at 948.479 kb on - strand at 948.489 kb on + strand at 948.515 kb on - strand at 948.515 kb on - strand at 948.515 kb on - strand at 948.515 kb on - strand at 948.516 kb on + strand at 948.516 kb on + strand at 948.516 kb on + strand at 948.516 kb on + strand at 948.516 kb on + strand at 948.517 kb on - strand at 948.517 kb on - strand at 948.517 kb on - strand at 948.517 kb on - strand at 948.517 kb on - strand at 948.520 kb on - strand at 948.520 kb on - strand at 948.643 kb on + strand at 948.644 kb on - strand at 948.774 kb on - strand at 948.836 kb on + strand at 948.836 kb on + strand at 948.837 kb on - strand at 948.837 kb on - strand at 948.837 kb on - strand at 948.837 kb on - strand at 948.867 kb on + strand at 948.868 kb on - strand at 948.915 kb on + strand at 948.938 kb on + strand at 948.939 kb on - strand at 948.939 kb on - strand at 949.313 kb on + strand at 949.313 kb on + strand at 949.313 kb on + strand at 949.313 kb on + strand at 949.313 kb on + strand at 949.314 kb on - strand at 949.314 kb on - strand at 949.314 kb on - strand at 949.365 kb on + strand, within ABZR87_RS04535 at 949.365 kb on + strand, within ABZR87_RS04535 at 949.365 kb on + strand, within ABZR87_RS04535 at 949.365 kb on + strand, within ABZR87_RS04535 at 949.366 kb on - strand, within ABZR87_RS04535 at 949.366 kb on - strand, within ABZR87_RS04535 at 949.366 kb on - strand, within ABZR87_RS04535 at 949.366 kb on - strand, within ABZR87_RS04535 at 949.910 kb on - strand, within ABZR87_RS04535 at 949.910 kb on - strand, within ABZR87_RS04535 at 949.910 kb on - strand, within ABZR87_RS04535 at 950.201 kb on + strand, within ABZR87_RS04535 at 950.201 kb on + strand, within ABZR87_RS04535 at 950.201 kb on + strand, within ABZR87_RS04535 at 950.202 kb on - strand, within ABZR87_RS04535 at 950.202 kb on - strand, within ABZR87_RS04535 at 950.202 kb on - strand, within ABZR87_RS04535 at 950.202 kb on - strand, within ABZR87_RS04535 at 950.202 kb on - strand, within ABZR87_RS04535 at 950.202 kb on - strand, within ABZR87_RS04535 at 950.385 kb on + strand at 950.386 kb on - strand at 950.490 kb on - strand at 950.515 kb on + strand at 950.515 kb on + strand at 950.516 kb on - strand at 950.516 kb on - strand at 950.516 kb on - strand at 950.516 kb on - strand at 950.516 kb on - strand at 950.516 kb on - strand at 950.530 kb on + strand at 950.531 kb on - strand at 950.556 kb on + strand at 950.556 kb on + strand at 950.557 kb on - strand at 950.557 kb on - strand at 950.557 kb on - strand at 950.557 kb on - strand at 950.567 kb on + strand at 950.567 kb on + strand at 950.567 kb on + strand at 950.567 kb on + strand at 950.568 kb on - strand at 950.568 kb on - strand at 950.722 kb on + strand at 950.861 kb on + strand, within ABZR87_RS04540 at 950.861 kb on + strand, within ABZR87_RS04540 at 950.861 kb on + strand, within ABZR87_RS04540 at 950.861 kb on + strand, within ABZR87_RS04540 at 950.861 kb on + strand, within ABZR87_RS04540 at 950.862 kb on - strand, within ABZR87_RS04540 at 950.862 kb on - strand, within ABZR87_RS04540 at 950.862 kb on - strand, within ABZR87_RS04540 at 951.077 kb on + strand, within ABZR87_RS04540 at 951.078 kb on - strand, within ABZR87_RS04540 at 951.176 kb on + strand, within ABZR87_RS04540 at 951.176 kb on + strand, within ABZR87_RS04540 at 951.176 kb on + strand, within ABZR87_RS04540 at 951.176 kb on + strand, within ABZR87_RS04540 at 951.176 kb on + strand, within ABZR87_RS04540 at 951.176 kb on + strand, within ABZR87_RS04540 at 951.176 kb on + strand, within ABZR87_RS04540 at 951.176 kb on + strand, within ABZR87_RS04540 at 951.177 kb on - strand, within ABZR87_RS04540 at 951.177 kb on - strand, within ABZR87_RS04540 at 951.177 kb on - strand, within ABZR87_RS04540 at 951.177 kb on - strand, within ABZR87_RS04540 at 951.177 kb on - strand, within ABZR87_RS04540 at 951.302 kb on + strand at 951.302 kb on + strand at 951.303 kb on - strand at 951.303 kb on - strand at 951.335 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 948,288 + -1.1 948,289 - +1.0 948,301 + -4.3 948,301 + -3.1 948,302 - +3.7 948,313 + +1.7 948,313 + -0.7 948,314 - +0.5 948,314 - +1.8 948,459 - +2.2 948,459 - +2.5 948,459 - +2.2 948,459 - +2.2 948,474 + -1.4 948,474 + +1.4 948,474 + -0.2 948,475 - +2.7 948,475 - +1.7 948,478 + -1.0 948,478 + -3.4 948,478 + +1.4 948,478 + +1.7 948,479 - +2.3 948,479 - +2.1 948,479 - +0.0 948,479 - +2.5 948,489 + -1.7 948,515 - +0.3 948,515 - +2.5 948,515 - +1.6 948,515 - +2.8 948,516 + +3.4 948,516 + +3.5 948,516 + +0.4 948,516 + +0.6 948,516 + +3.2 948,517 - +3.8 948,517 - +3.5 948,517 - +3.2 948,517 - +3.3 948,517 - +2.5 948,520 - +2.8 948,520 - +2.8 948,643 + +2.0 948,644 - -3.9 948,774 - -2.1 948,836 + -0.0 948,836 + -0.1 948,837 - -1.7 948,837 - -2.1 948,837 - +0.3 948,837 - -1.6 948,867 + +0.3 948,868 - -0.4 948,915 + +1.5 948,938 + -3.1 948,939 - -1.4 948,939 - -4.9 949,313 + +0.5 949,313 + +0.7 949,313 + -3.7 949,313 + +1.0 949,313 + -2.3 949,314 - -0.1 949,314 - -1.4 949,314 - -2.0 949,365 + ABZR87_RS04535 0.11 -0.0 949,365 + ABZR87_RS04535 0.11 -2.5 949,365 + ABZR87_RS04535 0.11 +0.1 949,365 + ABZR87_RS04535 0.11 -4.0 949,366 - ABZR87_RS04535 0.11 +0.8 949,366 - ABZR87_RS04535 0.11 -1.8 949,366 - ABZR87_RS04535 0.11 -2.5 949,366 - ABZR87_RS04535 0.11 -1.7 949,910 - ABZR87_RS04535 0.56 +1.4 949,910 - ABZR87_RS04535 0.56 +1.7 949,910 - ABZR87_RS04535 0.56 +0.2 950,201 + ABZR87_RS04535 0.80 -1.1 950,201 + ABZR87_RS04535 0.80 +2.4 950,201 + ABZR87_RS04535 0.80 +1.5 950,202 - ABZR87_RS04535 0.80 -3.7 950,202 - ABZR87_RS04535 0.80 -0.6 950,202 - ABZR87_RS04535 0.80 -2.8 950,202 - ABZR87_RS04535 0.80 -3.3 950,202 - ABZR87_RS04535 0.80 -1.4 950,202 - ABZR87_RS04535 0.80 -3.3 950,385 + +0.7 950,386 - -0.8 950,490 - -2.2 950,515 + +0.5 950,515 + -3.8 950,516 - +1.6 950,516 - +0.7 950,516 - -1.7 950,516 - +2.0 950,516 - +0.9 950,516 - -2.3 950,530 + -0.4 950,531 - +2.0 950,556 + -3.9 950,556 + -4.0 950,557 - -1.7 950,557 - -2.7 950,557 - -2.2 950,557 - -1.9 950,567 + -1.4 950,567 + -1.1 950,567 + +2.0 950,567 + -3.4 950,568 - +0.3 950,568 - -1.1 950,722 + -2.5 950,861 + ABZR87_RS04540 0.26 -1.2 950,861 + ABZR87_RS04540 0.26 +1.3 950,861 + ABZR87_RS04540 0.26 -1.2 950,861 + ABZR87_RS04540 0.26 -3.9 950,861 + ABZR87_RS04540 0.26 -1.1 950,862 - ABZR87_RS04540 0.27 -3.7 950,862 - ABZR87_RS04540 0.27 -1.1 950,862 - ABZR87_RS04540 0.27 +2.1 951,077 + ABZR87_RS04540 0.60 -0.6 951,078 - ABZR87_RS04540 0.60 -1.7 951,176 + ABZR87_RS04540 0.75 -2.8 951,176 + ABZR87_RS04540 0.75 -1.0 951,176 + ABZR87_RS04540 0.75 +0.0 951,176 + ABZR87_RS04540 0.75 -2.2 951,176 + ABZR87_RS04540 0.75 -2.1 951,176 + ABZR87_RS04540 0.75 +1.7 951,176 + ABZR87_RS04540 0.75 -2.9 951,176 + ABZR87_RS04540 0.75 -2.7 951,177 - ABZR87_RS04540 0.75 +0.5 951,177 - ABZR87_RS04540 0.75 -0.2 951,177 - ABZR87_RS04540 0.75 +2.2 951,177 - ABZR87_RS04540 0.75 +2.6 951,177 - ABZR87_RS04540 0.75 +0.4 951,302 + +1.4 951,302 + -0.7 951,303 - -2.4 951,303 - -0.7 951,335 + +0.3
Or see this region's nucleotide sequence