Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35340

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
3,706,022	-				-1.5
3,706,034	-				+0.5
3,706,167	-		PGA1_c35330	0.25	-0.3
3,706,167	-		PGA1_c35330	0.25	-0.7
3,706,201	-		PGA1_c35330	0.31	-0.2
3,706,223	+		PGA1_c35330	0.34	+0.4
3,706,231	-		PGA1_c35330	0.35	-1.1
3,706,231	-		PGA1_c35330	0.35	+0.6
3,706,256	+		PGA1_c35330	0.39	-0.2
3,706,256	+		PGA1_c35330	0.39	+0.9
3,706,377	+		PGA1_c35330	0.57	-0.7
3,706,377	+		PGA1_c35330	0.57	-0.5
3,706,377	+		PGA1_c35330	0.57	+0.5
3,706,377	+		PGA1_c35330	0.57	-0.1
3,706,377	+		PGA1_c35330	0.57	+0.5
3,706,385	-		PGA1_c35330	0.58	-0.3
3,706,385	-		PGA1_c35330	0.58	-0.4
3,706,386	+		PGA1_c35330	0.58	-1.3
3,706,456	+		PGA1_c35330	0.68	-1.8
3,706,456	+		PGA1_c35330	0.68	-1.7
3,706,479	-		PGA1_c35330	0.72	+0.4
3,706,517	-		PGA1_c35330	0.77	-0.1
3,706,517	-		PGA1_c35330	0.77	+0.3
3,706,638	-				-0.7
3,706,697	-				-0.6
3,706,716	+				+0.1
3,706,716	+				+0.3
3,706,716	+				+0.2
3,706,716	+				+0.2
3,706,716	+				+1.1
3,706,716	+				+1.0
3,706,716	+				-0.2
3,706,716	+				+0.3
3,706,716	+				-0.4
3,706,723	+				-0.6
3,706,724	-				-0.4
3,706,724	-				-0.3
3,706,724	-				-0.5
3,706,724	-				+0.5
3,706,724	-				+0.2
3,706,724	-				+0.4
3,706,735	-				+0.3
3,706,736	-				-1.1
3,706,853	-		PGA1_c35340	0.16	+0.8
3,706,858	-		PGA1_c35340	0.17	+0.2
3,706,869	-		PGA1_c35340	0.18	-0.1
3,706,910	-		PGA1_c35340	0.22	+1.2
3,706,913	-		PGA1_c35340	0.22	+0.3
3,706,914	-		PGA1_c35340	0.22	+0.9
3,706,955	-		PGA1_c35340	0.26	+0.9
3,706,957	-		PGA1_c35340	0.26	-0.3
3,706,957	-		PGA1_c35340	0.26	-1.9
3,706,957	-		PGA1_c35340	0.26	+1.0
3,707,016	-		PGA1_c35340	0.32	-0.9
3,707,033	-		PGA1_c35340	0.34	+0.0
3,707,100	-		PGA1_c35340	0.41	-0.1
3,707,132	+		PGA1_c35340	0.44	-0.5
3,707,132	+		PGA1_c35340	0.44	-0.7
3,707,136	+		PGA1_c35340	0.44	-0.0
3,707,145	+		PGA1_c35340	0.45	+0.1
3,707,167	+		PGA1_c35340	0.47	-1.8
3,707,177	+		PGA1_c35340	0.48	-0.8
3,707,185	-		PGA1_c35340	0.49	-0.0
3,707,185	-		PGA1_c35340	0.49	-1.0
3,707,208	+		PGA1_c35340	0.52	-0.4
3,707,266	-		PGA1_c35340	0.57	-0.7
3,707,274	-		PGA1_c35340	0.58	+0.8
3,707,276	-		PGA1_c35340	0.58	-1.6
3,707,288	-		PGA1_c35340	0.60	+0.1
3,707,315	+		PGA1_c35340	0.62	-1.6
3,707,365	+		PGA1_c35340	0.67	-1.8
3,707,365	+		PGA1_c35340	0.67	-0.1
3,707,373	-		PGA1_c35340	0.68	+0.1
3,707,375	+		PGA1_c35340	0.68	+0.6
3,707,384	+		PGA1_c35340	0.69	-2.1
3,707,410	+		PGA1_c35340	0.72	+0.2
3,707,410	+		PGA1_c35340	0.72	+0.3
3,707,410	+		PGA1_c35340	0.72	-0.7
3,707,418	-		PGA1_c35340	0.73	+0.3
3,707,470	+		PGA1_c35340	0.78	-0.7
3,707,471	+		PGA1_c35340	0.78	-0.4
3,707,479	-		PGA1_c35340	0.79	+1.6
3,707,479	-		PGA1_c35340	0.79	+0.7
3,707,479	-		PGA1_c35340	0.79	+0.0
3,707,479	-		PGA1_c35340	0.79	-0.2
3,707,514	+		PGA1_c35340	0.82	+0.2
3,707,530	-		PGA1_c35340	0.84	+0.4
3,707,548	+		PGA1_c35340	0.86	-0.2
3,707,548	+		PGA1_c35340	0.86	+1.2
3,707,609	+				+0.2
3,707,670	-				+0.4
3,707,695	-				+0.7
3,708,171	-				+0.6
3,708,172	+				+0.1
3,708,205	-				+0.6
3,708,205	-				-0.3
3,708,222	+				+0.4
3,708,222	+				-0.5
3,708,230	-				-0.0
3,708,230	-				+0.1
3,708,255	+				-0.3
3,708,273	-				+0.4
3,708,295	+				+0.1
3,708,332	-				-1.0
3,708,332	-				+1.6
3,708,332	-				+0.5
3,708,332	-				+0.7
3,708,332	-				-0.5
3,708,332	-				-1.0
3,708,332	-				-0.3
3,708,340	+				+0.4
3,708,343	+				+0.1
3,708,343	+				+1.3
3,708,343	+				+0.8
3,708,348	+				+0.0
3,708,356	-				-1.4
3,708,358	+				-0.5
3,708,366	-				+0.4
3,708,366	-				+0.1
3,708,382	+				+0.7
3,708,382	+				-0.1
3,708,382	+				-2.2
3,708,382	+				-0.7
3,708,382	+				+0.3
3,708,382	+				+0.4
3,708,382	+				-0.6
3,708,382	+				+0.4
3,708,382	+				-0.5
3,708,382	+				+0.0
3,708,382	+				+0.7
3,708,382	+				-0.1
3,708,384	+				-0.8
3,708,385	-				+0.2
3,708,390	+				-0.0
3,708,390	-				-0.4
3,708,390	-				-1.0
3,708,390	-				-0.3
3,708,390	-				+1.0
3,708,390	-				+0.8
3,708,390	-				-1.8
3,708,390	-				+0.4
3,708,390	-				+2.0
3,708,390	-				+0.3
3,708,390	-				+0.5
3,708,390	-				+0.7
3,708,390	-				-0.5
3,708,392	-				+0.1
3,708,395	+				+0.4
3,708,405	+				+0.3
3,708,405	+				+0.8
3,708,405	+				+0.9
3,708,405	+				+0.7
3,708,405	+				+0.3
3,708,405	+				-0.1
3,708,405	+				+0.6
3,708,405	+				-1.6
3,708,405	+				+0.3
3,708,405	+				+1.1
3,708,405	+				+0.6
3,708,405	+				-0.1
3,708,405	+				+1.6
3,708,405	+				+1.1
3,708,405	+				+0.3
3,708,405	+				-0.3
3,708,405	+				+0.6
3,708,405	+				+1.5
3,708,405	+				+0.7
3,708,413	-				-0.6
3,708,413	-				+1.3
3,708,413	-				+0.2
3,708,413	-				+0.6
3,708,413	-				+0.1
3,708,413	-				-0.0
3,708,413	-				+0.4
3,708,413	-				-0.2
3,708,413	-				+0.2
3,708,413	-				+0.6
3,708,413	-				-0.1
3,708,413	-				+0.1
3,708,413	-				+0.8
3,708,413	-				+0.1
3,708,413	-				+0.4
3,708,413	-				-0.4
3,708,413	-				-0.1
3,708,413	-				-1.3
3,708,413	-				+1.0
3,708,413	-				-0.3
3,708,413	-				+0.4
3,708,413	-				-0.5
3,708,479	-		PGA1_c35360	0.14	+0.3
3,708,479	-		PGA1_c35360	0.14	+0.1
3,708,480	-		PGA1_c35360	0.14	-0.4
3,708,524	-		PGA1_c35360	0.17	+0.6
3,708,539	-		PGA1_c35360	0.17	-0.2
3,708,552	-		PGA1_c35360	0.18	-0.5
3,708,564	+		PGA1_c35360	0.19	+0.8
3,708,564	+		PGA1_c35360	0.19	+1.0
3,708,564	+		PGA1_c35360	0.19	-0.1
3,708,572	-		PGA1_c35360	0.20	+1.4
3,708,572	-		PGA1_c35360	0.20	-1.4
3,708,572	-		PGA1_c35360	0.20	-0.1
3,708,606	-		PGA1_c35360	0.22	+1.2
3,708,622	+		PGA1_c35360	0.23	+0.2
3,708,622	+		PGA1_c35360	0.23	-1.6
3,708,630	-		PGA1_c35360	0.23	-1.1
3,708,630	-		PGA1_c35360	0.23	-1.0
3,708,630	-		PGA1_c35360	0.23	+1.8
3,708,656	+		PGA1_c35360	0.25	+0.4
3,708,668	+		PGA1_c35360	0.26	+0.1
3,708,682	+		PGA1_c35360	0.27	+0.9
3,708,682	+		PGA1_c35360	0.27	+0.6
3,708,685	-		PGA1_c35360	0.27	+0.6
3,708,685	-		PGA1_c35360	0.27	+0.2
3,708,687	+		PGA1_c35360	0.27	+0.6